seqHMM-package	seqHMM-package
alphabet	reexports
biofam3c	biofam3c
bootstrap_coefs	bootstrap
bootstrap_coefs.mnhmm	bootstrap
bootstrap_coefs.nhmm	bootstrap
build_hmm	build_hmm
build_lcm	build_lcm
build_mhmm	build_mhmm
build_mm	build_mm
build_mmm	build_mmm
cluster_names	cluster_names
cluster_names<-	cluster_names-set
coef.mnhmm	coef
coef.nhmm	coef
colorpalette	colorpalette
data_to_stslist	data_to_stslist
estimate_mnhmm	estimate_mnhmm
estimate_nhmm	estimate_nhmm
fanhmm_leaves	fanhmm_leaves
fit_model	fit_model
forward_backward	forward_backward
forward_backward.hmm	forward_backward
forward_backward.mhmm	forward_backward
forward_backward.mnhmm	forward_backward
forward_backward.nhmm	forward_backward
get_cluster_probs	cluster_probs
get_cluster_probs.mhmm	cluster_probs
get_cluster_probs.mnhmm	cluster_probs
get_emission_probs	emission_probs
get_emission_probs.hmm	emission_probs
get_emission_probs.mhmm	emission_probs
get_emission_probs.mnhmm	emission_probs
get_emission_probs.nhmm	emission_probs
get_initial_probs	initial_probs
get_initial_probs.hmm	initial_probs
get_initial_probs.mhmm	initial_probs
get_initial_probs.mnhmm	initial_probs
get_initial_probs.nhmm	initial_probs
get_marginals	get_marginals
get_transition_probs	transition_probs
get_transition_probs.hmm	transition_probs
get_transition_probs.mhmm	transition_probs
get_transition_probs.mnhmm	transition_probs
get_transition_probs.nhmm	transition_probs
gridplot	gridplot
hidden_paths	hidden_paths
hidden_paths.hmm	hidden_paths
hidden_paths.mhmm	hidden_paths
hidden_paths.mnhmm	hidden_paths
hidden_paths.nhmm	hidden_paths
hmm_biofam	hmm_biofam
hmm_mvad	hmm_mvad
leaves	leaves
logLik.hmm	logLik_hmm
logLik.mhmm	logLik_hmm
logLik.mnhmm	logLik_nhmm
logLik.nhmm	logLik_nhmm
mc_to_sc	mc_to_sc
mc_to_sc_data	mc_to_sc_data
mhmm_biofam	mhmm_biofam
mhmm_mvad	mhmm_mvad
most_probable_cluster	most_probable_cluster
mssplot	mssplot
nobs.hmm	nobs
nobs.mhmm	nobs
nobs.mnhmm	nobs
nobs.nhmm	nobs
permute_states	permute_states
plot.hmm	plot.hmm
plot.mhmm	plot.mhmm
plot.ssp	plot.ssp
plot_colors	plot_colors
posterior_cluster_probabilities	posterior_cluster_probabilities
posterior_probs	posterior_probs
posterior_probs.hmm	posterior_probs
posterior_probs.mhmm	posterior_probs
posterior_probs.mnhmm	posterior_probs
posterior_probs.nhmm	posterior_probs
predict.mnhmm	predict
predict.nhmm	predict
print.hmm	print
print.mhmm	print
print.mnhmm	print
print.nhmm	print
print.summary_mhmm	print
reexports	reexports
return_msg	return_msg
separate_mhmm	separate_mhmm
seqdef	reexports
seqHMM	seqHMM-package
seqHMM-deprecated	seqHMM-deprecated
seqstatf	reexports
simulate_emission_probs	simulate_pars
simulate_hmm	simulate_hmm
simulate_initial_probs	simulate_pars
simulate_mhmm	simulate_mhmm
simulate_mnhmm	simulate_mnhmm
simulate_nhmm	simulate_nhmm
simulate_transition_probs	simulate_pars
sort_sequences	sort_sequences
ssp	ssp
ssplot	ssplot
stacked_sequence_plot	stacked_sequence_plot
state_names	state_names
state_names.hmm	state_names
state_names.mhmm	state_names
state_names.mnhmm	state_names
state_names.nhmm	state_names
state_names<-	state_names
state_names<-.hmm	state_names
state_names<-.mhmm	state_names
state_names<-.mnhmm	state_names
state_names<-.nhmm	state_names
stslist_to_data	data_to_stslist
summary.mhmm	summary.mhmm
summary.mnhmm	summary.mnhmm
trim_model	trim_model
update.mnhmm	update_nhmm
update.nhmm	update_nhmm
vcov.mhmm	vcov.mhmm
