Read 'SBML' Models and Convert Them to Simulation Code


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Documentation for package ‘r2sbml’ version 0.1.0

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convertReactions Convert an SBML model to simulation code
echoSBML Check an SBML file for errors
getCmtNames Names of the compartments in a model
getCmtSizes Sizes of the compartments in a model
getEventMath Print the events of a model
getFunctionDefinition Print the function definitions of a model
getModel Read an SBML model
getNumSpecies Number of species in a model
getParameterTable Table of the parameters in a model
getReactionMath Print the rate laws of a model
getReactionTable Table of the reactions in a model
getRuleMath Print the rules of a model
getSpeciesIC Initial values of the species in a model
getSpeciesNames Names of the species in a model
getSpeciesTable Table of the species in a model
printSBML Summarise an SBML file