GPU-Aware Single-Cell Analysis Workflows

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Documentation for package ‘cudacellr’ version 0.4.0

• DESCRIPTION file
• User guides, package vignettes and other documentation
• Package NEWS
• Package README

Help Pages

cudacell_sce	Run a cudacell workflow on a SingleCellExperiment
cudacell_seurat	Run a cudacell workflow on a Seurat object
cudacell_workflow	Run the initial cudacellr workflow
cuda_cell_neighbors	Construct a nearest-neighbour representation
cuda_cell_pca	Run PCA on highly variable single-cell features
cuda_hvg	Select highly variable features
cuda_normalize_counts	Normalize a single-cell count matrix
cuda_provenance-methods	Inspect provenance stored on native single-cell containers
cuda_provenance.Seurat	Inspect provenance stored on native single-cell containers
cuda_provenance.SingleCellExperiment	Inspect provenance stored on native single-cell containers