# Analysis and Visualisation of Hydrogen/Deuterium Exchange Mass Spectrometry Data

## Documentation for package ‘HaDeX’ version 1.2.2

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

HaDeX-package | HaDeX
add_stat_dependency | Calculates confidence limits
calculate_confidence_limit_values | Calculate the value of confidence limit
calculate_kinetics | Calculate kinetic data
calculate_state_deuteration | Calculate deuteration
comparison_plot | Plot comparison plot
HaDeX | HaDeX
HaDeX_gui | HaDeX Graphical User Interface
plot_coverage | Plot peptide coverage
plot_kinetics | Plot kinetics data
plot_position_frequency | Plot position frequency
prepare_dataset | Calculate data
quality_control | Experiment quality control
read_hdx | Read HDX-MS data file
reconstruct_sequence | Reconstruct protein sequence
woods_plot | Plot Woods' plot