# Generated by roxygen2: do not edit by hand

export(GEX_DEgenes)
export(GEX_GSEA)
export(GEX_cluster_genes)
export(GEX_cluster_genes_heatmap)
export(GEX_cluster_membership)
export(GEX_coexpression_coefficient)
export(GEX_dottile_plot)
export(GEX_gene_visualization)
export(GEX_heatmap)
export(GEX_lineage_trajectories)
export(GEX_pairwise_DEGs)
export(GEX_phenotype)
export(GEX_phenotype_per_clone)
export(GEX_proportions_barplot)
export(GEX_scatter_coexpression)
export(GEX_volcano)
export(PlatypusDB_AIRR_to_VGM)
export(PlatypusDB_VGM_to_AIRR)
export(PlatypusDB_load_from_disk)
export(VDJ_GEX_clonotype_clusters_circos)
export(VDJ_GEX_matrix)
export(VDJ_GEX_overlay_clones)
export(VDJ_GEX_stats)
export(VDJ_VJ_usage_circos)
export(VDJ_Vgene_usage)
export(VDJ_Vgene_usage_barplot)
export(VDJ_Vgene_usage_stacked_barplot)
export(VDJ_abundances)
export(VDJ_alpha_beta_Vgene_circos)
export(VDJ_antigen_integrate)
export(VDJ_assemble_for_PnP)
export(VDJ_build)
export(VDJ_call_enclone)
export(VDJ_circos)
export(VDJ_clonal_barplot)
export(VDJ_clonal_donut)
export(VDJ_clonal_expansion)
export(VDJ_clonotype)
export(VDJ_clonotype_v3_w_enclone)
export(VDJ_contigs_to_vgm)
export(VDJ_db_annotate)
export(VDJ_db_load)
export(VDJ_diversity)
export(VDJ_dynamics)
export(VDJ_expand_aberrants)
export(VDJ_extract_germline_consensus_ref)
export(VDJ_germline)
export(VDJ_get_public)
export(VDJ_kmers)
export(VDJ_logoplot_vector)
export(VDJ_network)
export(VDJ_ordination)
export(VDJ_overlap_heatmap)
export(VDJ_phylogenetic_trees)
export(VDJ_phylogenetic_trees_plot)
export(VDJ_plot_SHM)
export(VDJ_public)
export(VDJ_rarefaction)
export(VDJ_variants_per_clone)
export(VGM_build)
export(VGM_expand_featurebarcodes)
export(VGM_expanded_clones)
export(VGM_integrate)
importFrom(ggtree,"%<+%")
importFrom(magrittr,"%<>%")
importFrom(magrittr,"%>%")
