export(
adjust.time, cdf.to.ftr, EIC.plot, EIC.plot.learn, feature.align, load.lcms, plot_cdf_2d, plot_txt_2d, present.cdf.3d, proc.cdf, proc.cdf.2d, proc.txt, prof.to.features, recover.weaker
, semi.sup, semi.sup.learn, find.tol, find.turn.point, make.known.table, target.search, two.step.hybrid, semi.sup.2d, two.step.hybrid.2d)

import(doParallel, foreach, iterators, ROCR, Rcpp)

useDynLib(apLCMS)


importFrom("stats", "dexp", "dist", "embed", "weighted.mean", "median", "predict", "density", "approx", "quantile", "ksmooth", "glm", "runif", "dnorm", "lm", "sd", "na.omit", "binomial")
importFrom("graphics", "par", "lines", "abline", "points", "text", "boxplot", "hist")
importFrom("grDevices", "topo.colors", "colorRampPalette")
importFrom("parallel", "makeCluster", "clusterEvalQ", "stopCluster")
importFrom(utils, read.table)
importFrom("rgl", "aspect3d", "decorate3d", "par3d", "rotationMatrix", "surface3d")
importFrom("mzR", "close", "header", "openMSfile", "peaks")
importFrom("e1071", "svm")
importFrom("gbm", "gbm")
importFrom("randomForest", "randomForest")
importFrom("MASS", "fitdistr")
importFrom("splines", "interpSpline")
importFrom("ROCS", "rocs.x")