Package: bioregion
Type: Package
Title: Comparison of Bioregionalisation Methods
Version: 1.2.0
Authors@R: 
    c(person(given = "Maxime",
              family = "Lenormand",
              email = "maxime.lenormand@inrae.fr",
              role = c("aut", "cre"),
              comment = c(ORCID = "0000-0001-6362-3473")),
       person(given = "Boris",
              family = "Leroy",
              role = c("aut"),
              email = "boris.leroy@gmail.com",
              comment = c(ORCID = "0000-0002-7686-4302")),
       person(given = "Pierre",
             family = "Denelle",
             role = c("aut"),
             email = "pierre.denelle@gmail.com",
             comment = c(ORCID = "0000-0001-5037-2281"))
       )
Description: The main purpose of this package is to propose a transparent methodological framework to compare bioregionalisation methods based on hierarchical and non-hierarchical clustering algorithms (Kreft & Jetz (2010) <doi:10.1111/j.1365-2699.2010.02375.x>) and network algorithms (Lenormand et al. (2019) <doi:10.1002/ece3.4718> and Leroy et al. (2019) <doi:10.1111/jbi.13674>).
Depends: R (>= 4.0.0)
License: GPL-3
Encoding: UTF-8
LazyData: true
Imports: ape, apcluster, bipartite, cluster, data.table, dbscan,
        dynamicTreeCut, fastcluster, fastkmedoids, ggplot2, grDevices,
        httr, igraph, mathjaxr, Matrix, phangorn, Rdpack, rlang,
        rmarkdown, segmented, sf, stats, tidyr, utils
RdMacros: mathjaxr, Rdpack
LinkingTo: Rcpp
Suggests: ade4, dplyr, knitr, microbenchmark, rnaturalearth,
        rnaturalearthdata, testthat (>= 3.0.0)
VignetteBuilder: knitr
RoxygenNote: 7.3.2
URL: https://github.com/bioRgeo/bioregion,
        https://bioRgeo.github.io/bioregion/
BugReports: https://github.com/bioRgeo/bioregion/issues
Config/testthat/edition: 3
NeedsCompilation: yes
Packaged: 2025-01-31 15:50:27 UTC; maxime
Author: Maxime Lenormand [aut, cre] (<https://orcid.org/0000-0001-6362-3473>),
  Boris Leroy [aut] (<https://orcid.org/0000-0002-7686-4302>),
  Pierre Denelle [aut] (<https://orcid.org/0000-0001-5037-2281>)
Maintainer: Maxime Lenormand <maxime.lenormand@inrae.fr>
Repository: CRAN
Date/Publication: 2025-01-31 16:40:02 UTC
Built: R 4.6.0; x86_64-w64-mingw32; 2026-01-20 05:02:46 UTC; windows
Archs: x64
