Package: vermeulen
Type: Package
Title: Biomarker Data Set by Vermeulen et al. (2009)
Version: 0.1.2
Authors@R: c(
    person(given = "Ramiro", family = "Magno", email = "rmagno@pattern.institute",
    role = c("aut", "cre"), comment = c(ORCID = "0000-0001-5226-3441")),
    person("Pattern Institute",
    role = c("cph", "fnd"))
    )
Description: The biomarker data set by Vermeulen et al. (2009)
    <doi:10.1016/S1470-2045(09)70154-8> is provided. The data
    source, however, is by Ruijter et al. (2013)
    <doi:10.1016/j.ymeth.2012.08.011>. The original data set may
    be downloaded from
    <https://medischebiologie.nl/wp-content/uploads/2019/02/qpcrdatamethods.zip>.
    This data set is for a real-time quantitative polymerase chain reaction
    (PCR) experiment that comprises the raw fluorescence data of 24,576
    amplification curves. This data set comprises 59 genes of interest and 5
    reference genes. Each gene was assessed on 366 neuroblastoma complementary
    DNA (cDNA) samples and on 18 standard dilution series samples (10-fold
    5-point dilution series x 3 replicates + no template controls (NTC) x 3
    replicates).
License: CC BY 4.0
Encoding: UTF-8
RoxygenNote: 7.3.1
Depends: R (>= 2.10)
Imports: memoise
Suggests: dplyr, ggplot2, rmarkdown, spelling, testthat (>= 3.0.0),
        tibble
Language: en-US
URL: https://github.com/ramiromagno/vermeulen,
        https://rmagno.eu/vermeulen/
BugReports: https://github.com/ramiromagno/vermeulen/issues
Config/testthat/edition: 3
NeedsCompilation: no
Packaged: 2024-04-22 21:30:34 UTC; rmagno
Author: Ramiro Magno [aut, cre] (<https://orcid.org/0000-0001-5226-3441>),
  Pattern Institute [cph, fnd]
Maintainer: Ramiro Magno <rmagno@pattern.institute>
Repository: CRAN
Date/Publication: 2024-04-22 22:40:03 UTC
Built: R 4.6.0; ; 2026-04-13 02:43:13 UTC; windows
