4c4264dc175c3ad5533c832bcc227e2c *DESCRIPTION
fc2337bdbd453d7b4f8b29bc76025f29 *NAMESPACE
eccae55b07011e062d130c49d896933a *NEWS.md
2971a0bd609dee3d4daefc7299136afb *R/RcppExports.R
c5ae10f6ec76a67b5a0fcdff1a252e02 *R/data.R
4b4ca67c0d3dd3756ac4b6ec87d8fa0e *R/estimateCoeffs.R
47846cf4fe650ca9a3131cce8d65f878 *R/findPattern.R
723af78add290cdac90cd346f637ce5a *R/genedrop.R
bb78bc2459ad07e2bc3ca9a66027c0ec *R/haploDraw.R
0cba2ba22962340e5e76390cd95f95b1 *R/ibdsim.R
c588be4e97173c800dc2d135166e04bd *R/ibdsim2-package.R
0df0c43d7fc9d74f9456574f08eeb76e *R/karyogram.R
7806d68c07a9dafdca77b71481d16d8f *R/launchApp.R
18478634c63e097d0eb03ce30ff8516f *R/map_constructors.R
8bb724ee92f939248de526ceaafdc556 *R/map_utils.R
a4e89b2b1957115db93104e3b3cccadf *R/meiosis.R
b6367013a8876bd194aa290edf738c0c *R/plotSegmentDistribution.R
bf41a089683e1c0342193f660809f0d1 *R/profileSimIBD.R
e47a8730f9d6586dfb7da8ee48e683e9 *R/realisedCoeffs.R
3d6ee299c0baeda9a25e5ecc4aa579fe *R/segment_utils.R
2b8c0a980f88e7091803a6130b491d0a *R/sysdata.rda
81e6e57ba5b82f6142a22d3f3b8887ef *R/utils.R
8bebc0545ca7c7b6475c90c0c413475b *R/zeroIBD.R
4d3683a936a4d29aaa61be1eb6ba210f *README.md
6af8e7644a2c366a25339b1923c9a048 *build/partial.rdb
e1128b370a9634ffbbfcde8eabadf8bb *data/legacy_decode19.rda
83ed975d2f0b5d635811ac9633c12175 *inst/CITATION
3f00eea1f6b6eda020848adea9dddc12 *inst/shiny/R/builtin-peds.R
68a6717deec4f97b3928383b80ae8fc1 *inst/shiny/R/plot-functions.R
bf655f755ec488ebd510b3f5be121c72 *inst/shiny/R/saveData.R
7bda143ea5dc80e92bcb205366f1fb05 *inst/shiny/R/utils.R
daf91127ed148e52539e1e33776eacf0 *inst/shiny/app.R
52d403ea99da764bc9430820438e3d40 *inst/shiny/www/GA.html
7a85d9373751f128c21cb41ceb7b8c56 *inst/shiny/www/custom.css
fb5f3c45ed9f0105b73dcdfe3c345aca *man/convertPos.Rd
a7aef2ef5725e45fa78d184b73a92d49 *man/customMap.Rd
39d922d9ce96bfa8f3841cf5682be9c5 *man/estimateCoeffs.Rd
cee46bf0a6f6a479fa3e7c84a516dcb5 *man/extractIds.Rd
15c441d478ce6bcf32f2ef7cc15c515d *man/figures/README-ibdsim2-example-distplot-1.png
fc0014f8f339ed7aa9892fd44de934f4 *man/figures/README-ibdsim2-example-ped-1.png
9ec2b957ef6da046d0f90830b909f235 *man/figures/README-quartet-haplo-1.png
ac9fe9b55df5d82bb763571aa71ca2f4 *man/figures/logo.png
3389736d3c0140769836f456a9911c85 *man/findPattern.Rd
39e75ba18c993cb6219e5d82ff990acc *man/haploDraw.Rd
95ccf02a03b9465b2b35f582a9d6bee8 *man/ibdsim.Rd
d88c5dadf9facc969cd77d45876ad574 *man/ibdsim2-package.Rd
c395191db7bbe362c0b4dd0e7725dd39 *man/karyoDiploid.Rd
542a7fef8b7c4839821d17628c08f08a *man/karyoHaploid.Rd
b5ef4530f633811a421b130091220d7d *man/karyogram2.Rd
38be6e42e6eb768c81f94a126b700156 *man/launchApp.Rd
edc8e1591c3b1b7db2d1c2fc290f347c *man/legacy_decode19.Rd
6c204dc6694ad0919b706f87ff262998 *man/loadMap.Rd
7727d2390c5ca80aec797f8b2f9a17d4 *man/maplengths.Rd
630e0f0c542bbfa84ffb062948399a90 *man/plotSegmentDistribution.Rd
2b73004c3cef7fd57ec924aa12083aa2 *man/profileSimIBD.Rd
b1ea078ab3f962b0cc03bd02d55a8fae *man/realised.Rd
59d5bfc538cf2fbe2b699fb296414e65 *man/segmentStats.Rd
c930cbcd6ea0e07fc09fc2e5c04f3437 *man/uniformMap.Rd
018228fb23866d2e12db0f6e27d68fd0 *man/zeroIBD.Rd
9f90fe2ce6224be82e7ce3422899a097 *src/RcppExports.cpp
1ed16eae919cc21fe6ece95cc11178dd *src/ibdsim2.cpp
d77f62387cc0e71fe3f28d569d8a71ef *tests/testthat.R
c3a93d7065dbfb67e982aba91103a035 *tests/testthat/test-estimates.R
b678772fec591b7e85d2aba93b2d35c6 *tests/testthat/test-ibdsim.R
799505732a38433d2c34943f7c4bb748 *tests/testthat/test-inbred-founders.R
4d081577d8358d033166896b1f0e9655 *tests/testthat/test-maps.R
ff33c5f1784800868a7c299d9046a1b4 *tests/testthat/test-meisosis.R
805802122f845ca9122f89311efaa01e *tests/testthat/test-patterns.R
f1d7e0cd57aee55057b8a556b88a5769 *tests/testthat/test-plotSegmentDistribution.R
7f3b588e5334025026a09d73d81c63db *tests/testthat/test-profilesim-ibd.R
1861d5c277316e742c4e7e98079611a4 *tests/testthat/test-recombine.R
eeeda8c7fdd566331eb474e7ebc2ad7f *tests/testthat/test-segments.R
