CRAN Package Check Results for Package LOMAR

Last updated on 2024-11-09 01:49:35 CET.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	0.5.0	29.67	67.73	97.40	OK
r-devel-linux-x86_64-debian-gcc	0.5.0	24.40	43.11	67.51	OK
r-devel-linux-x86_64-fedora-clang	0.5.0			179.59	OK
r-devel-linux-x86_64-fedora-gcc	0.5.0			169.43	ERROR
r-devel-windows-x86_64	0.5.0	38.00	198.00	236.00	OK
r-patched-linux-x86_64	0.5.0	34.09	62.73	96.82	OK
r-release-linux-x86_64	0.5.0	35.09	62.21	97.30	OK
r-release-macos-arm64	0.5.0			87.00	NOTE
r-release-macos-x86_64	0.5.0			162.00	NOTE
r-release-windows-x86_64	0.5.0	34.00	196.00	230.00	OK
r-oldrel-macos-arm64	0.5.0			88.00	NOTE
r-oldrel-macos-x86_64	0.5.0			167.00	NOTE
r-oldrel-windows-x86_64	0.5.0	43.00	276.00	319.00	OK

Check Details

Version: 0.5.0
Check: tests
Result: ERROR Running ‘testthat.R’ [23s/236s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > suppressPackageStartupMessages(library(LOMAR)) > > test_check("LOMAR") *** caught segfault *** address 0x1, cause 'memory not mapped' Traceback: 1: `[.ff_array`(A, ) 2: A[] 3: circle_hough_transform(img, rmin = 5, rmax = 5, threshold = 0.4) 4: eval(code, test_env) 5: eval(code, test_env) 6: withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error) 7: doTryCatch(return(expr), name, parentenv, handler) 8: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 9: tryCatchList(expr, names[-nh], parentenv, handlers[-nh]) 10: doTryCatch(return(expr), name, parentenv, handler) 11: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]]) 12: tryCatchList(expr, classes, parentenv, handlers) 13: tryCatch(withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error), error = handle_fatal, skip = function(e) { }) 14: test_code(desc, code, env = parent.frame(), default_reporter = local_interactive_reporter()) 15: test_that("Circle Hough transform works", { I <- points2img(points = as.data.frame(PS[[2]]), voxel.size = c(10, 10, 30), method = "histogram") img <- apply(I, c(1, 2), sum) df <- circle_hough_transform(img, rmin = 5, rmax = 5, threshold = 0.4) expect_equal(df[, c("x", "y", "r")], data.frame(x = 16, y = 12, r = 5))}) 16: eval(code, test_env) 17: eval(code, test_env) 18: withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error) 19: doTryCatch(return(expr), name, parentenv, handler) 20: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 21: tryCatchList(expr, names[-nh], parentenv, handlers[-nh]) 22: doTryCatch(return(expr), name, parentenv, handler) 23: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]]) 24: tryCatchList(expr, classes, parentenv, handlers) 25: tryCatch(withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error), error = handle_fatal, skip = function(e) { }) 26: test_code(test = NULL, code = exprs, env = env, default_reporter = StopReporter$new()) 27: source_file(path, env = env(env), desc = desc, error_call = error_call) 28: FUN(X[[i]], ...) 29: lapply(test_paths, test_one_file, env = env, desc = desc, error_call = error_call) 30: doTryCatch(return(expr), name, parentenv, handler) 31: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 32: tryCatchList(expr, classes, parentenv, handlers) 33: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL}) 34: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, error_call = error_call)) 35: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, error_call = error_call) 36: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel) 37: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed") 38: test_check("LOMAR") An irrecoverable exception occurred. R is aborting now ... Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.5.0
Check: installed package size
Result: NOTE installed size is 6.2Mb sub-directories of 1Mb or more: libs 5.0Mb Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64