CRAN Package Check Results for Package alakazam

Last updated on 2026-04-13 05:53:17 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.4.2 55.42 512.23 567.65 OK
r-devel-linux-x86_64-debian-gcc 1.4.2 43.78 373.31 417.09 OK
r-devel-linux-x86_64-fedora-clang 1.4.2 97.00 802.45 899.45 OK
r-devel-linux-x86_64-fedora-gcc 1.4.2 104.00 787.38 891.38 OK
r-devel-macos-arm64 1.4.2 15.00 124.00 139.00 OK
r-devel-windows-x86_64 1.4.2 61.00 581.00 642.00 OK
r-patched-linux-x86_64 1.4.2 49.65 485.02 534.67 OK
r-release-linux-x86_64 1.4.2 53.24 481.10 534.34 OK
r-release-macos-arm64 1.4.2 14.00 121.00 135.00 OK
r-release-macos-x86_64 1.4.2 41.00 494.00 535.00 OK
r-release-windows-x86_64 1.4.2 60.00 0.00 60.00 OK
r-oldrel-macos-arm64 1.4.2 14.00 122.00 136.00 OK
r-oldrel-macos-x86_64 1.4.2 40.00 537.00 577.00 OK
r-oldrel-windows-x86_64 1.4.2 80.00 694.00 774.00 ERROR

Check Details

Version: 1.4.2
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'AminoAcids-Vignette.Rmd' using rmarkdown ! Package pdftex.def Error: File `d70676dd2e3c0b2e2f04ee85a644abd5132b4cec.pdf' not found: using draft setting. Error: processing vignette 'AminoAcids-Vignette.Rmd' failed with diagnostics: LaTeX failed to compile D:/RCompile/CRANpkg/local/4.4/alakazam.Rcheck/vign_test/alakazam/vignettes/AminoAcids-Vignette.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See AminoAcids-Vignette.log for more info. --- failed re-building 'AminoAcids-Vignette.Rmd' --- re-building 'Diversity-Vignette.Rmd' using rmarkdown ! Package pdftex.def Error: File `66da982633bbaa251b0df4068bf2b2b0c2c76c0a.pdf' not found: using draft setting. Error: processing vignette 'Diversity-Vignette.Rmd' failed with diagnostics: LaTeX failed to compile D:/RCompile/CRANpkg/local/4.4/alakazam.Rcheck/vign_test/alakazam/vignettes/Diversity-Vignette.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See Diversity-Vignette.log for more info. --- failed re-building 'Diversity-Vignette.Rmd' --- re-building 'Fastq-Vignette.Rmd' using rmarkdown ! Package pdftex.def Error: File `6873cf164b607d5bdd91b93ae105ea9564066e26.pdf' not found: using draft setting. Error: processing vignette 'Fastq-Vignette.Rmd' failed with diagnostics: LaTeX failed to compile D:/RCompile/CRANpkg/local/4.4/alakazam.Rcheck/vign_test/alakazam/vignettes/Fastq-Vignette.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See Fastq-Vignette.log for more info. --- failed re-building 'Fastq-Vignette.Rmd' --- re-building 'Files-Vignette.Rmd' using rmarkdown --- finished re-building 'Files-Vignette.Rmd' --- re-building 'GeneUsage-Vignette.Rmd' using rmarkdown ! Package pdftex.def Error: File `02271af61dff2ced3a923c9c01b081810fb4c7d2.pdf' not found: using draft setting. Error: processing vignette 'GeneUsage-Vignette.Rmd' failed with diagnostics: LaTeX failed to compile D:/RCompile/CRANpkg/local/4.4/alakazam.Rcheck/vign_test/alakazam/vignettes/GeneUsage-Vignette.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See GeneUsage-Vignette.log for more info. --- failed re-building 'GeneUsage-Vignette.Rmd' SUMMARY: processing the following files failed: 'AminoAcids-Vignette.Rmd' 'Diversity-Vignette.Rmd' 'Fastq-Vignette.Rmd' 'GeneUsage-Vignette.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-oldrel-windows-x86_64

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They may not be fully stable and should be used with caution. We make no claims about them.