CRAN Package Check Results for Maintainer ‘Anne Philippe <anne.philippe at univ-nantes.fr>’

Last updated on 2025-03-23 17:51:40 CET.

Package	WARN	NOTE	OK
ArchaeoPhases	4	7	4
ArchaeoPhases.dataset			15
BayLum	1	3	11
RChronoModel		6	9

Package ArchaeoPhases

Current CRAN status: WARN: 4, NOTE: 7, OK: 4

Version: 2.0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: ActivityEvents-class.Rd: TimeSeries-class ArchaeoPhases-package.Rd: TimeScale-class CumulativeEvents-class.Rd: TimeSeries-class activity.Rd: TimeScale-class as_events.Rd: TimeScale-class as_phases.Rd: TimeScale-class bury.Rd: TimeScale-class data.frame.Rd: TimeScale-class interval_credible.Rd: TimeScale-class interval_hdr.Rd: TimeScale-class occurrence.Rd: TimeScale-class plot_events.Rd: TimeScale-class plot_phases.Rd: TimeScale-class read_bcal.Rd: TimeScale-class read_chronomodel.Rd: TimeScale-class read_oxcal.Rd: TimeScale-class summary.Rd: TimeScale-class tempo.Rd: TimeScale-class Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64

Version: 2.0
Check: whether package can be installed
Result: WARN Found the following significant warnings: Rd warning: ActivityEvents-class.Rd:19: missing link ‘TimeSeries-class’ Rd warning: ArchaeoPhases-package.Rd:25: missing link ‘TimeScale-class’ Rd warning: CumulativeEvents-class.Rd:35: missing link ‘TimeSeries-class’ Rd warning: activity.Rd:53: missing link ‘TimeScale-class’ Rd warning: as_events.Rd:22: missing link ‘TimeScale-class’ Rd warning: as_phases.Rd:36: missing link ‘TimeScale-class’ Rd warning: bury.Rd:50: missing link ‘TimeScale-class’ Rd warning: data.frame.Rd:25: missing link ‘TimeScale-class’ Rd warning: interval_credible.Rd:25: missing link ‘TimeScale-class’ Rd warning: interval_hdr.Rd:28: missing link ‘TimeScale-class’ Rd warning: occurrence.Rd:39: missing link ‘TimeScale-class’ Rd warning: plot_events.Rd:32: missing link ‘TimeScale-class’ Rd warning: plot_phases.Rd:35: missing link ‘TimeScale-class’ Rd warning: read_bcal.Rd:42: missing link ‘TimeScale-class’ Rd warning: read_chronomodel.Rd:47: missing link ‘TimeScale-class’ Rd warning: read_oxcal.Rd:38: missing link ‘TimeScale-class’ Rd warning: summary.Rd:19: missing link ‘TimeScale-class’ Rd warning: tempo.Rd:49: missing link ‘TimeScale-class’ Flavor: r-patched-linux-x86_64

Version: 2.0
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘ArchaeoData’ Flavors: r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 2.0
Check: whether package can be installed
Result: WARN Found the following significant warnings: Warning: read_bcal.Rd:27: unknown macro '\abbr' Warning: read_chronomodel.Rd:36: unknown macro '\abbr' Warning: read_oxcal.Rd:27: unknown macro '\abbr' Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 2.0
Check: Rd files
Result: WARN prepare_Rd: read_bcal.Rd:27: unknown macro '\abbr' prepare_Rd: read_chronomodel.Rd:36: unknown macro '\abbr' prepare_Rd: read_oxcal.Rd:27: unknown macro '\abbr' Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Package ArchaeoPhases.dataset

Current CRAN status: OK: 15

Package BayLum

Current CRAN status: WARN: 1, NOTE: 3, OK: 11

Version: 0.3.2
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: AgeC14_Computation.Rd: rjags AgeS_Computation.Rd: rjags, runjags Age_Computation.Rd: jags.model, rjags Age_OSLC14.Rd: rjags, runjags Generate_DataFile-deprecated.Rd: read_BIN2R, Luminescence Generate_DataFile_MG-deprecated.Rd: read_BIN2R Model_Age.Rd: rjags Model_AgeC14.Rd: rjags Model_AgeS.Rd: rjags Model_Palaeodose.Rd: rjags Palaeodose_Computation.Rd: jags.model, rjags create_DataFile.Rd: RLum.Analysis-class plot_MCMC.Rd: rjags plot_Scatterplots.Rd: rjags Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64

Version: 0.3.2
Check: whether package can be installed
Result: WARN Found the following significant warnings: Rd warning: AgeC14_Computation.Rd:86: missing link ‘rjags’ Rd warning: AgeC14_Computation.Rd:206: missing link ‘rjags’ Rd warning: AgeS_Computation.Rd:365: missing link ‘rjags’ Rd warning: AgeS_Computation.Rd:365: missing link ‘runjags’ Rd warning: Age_Computation.Rd:75: missing link ‘jags.model’ Rd warning: Age_Computation.Rd:78: missing link ‘jags.model’ Rd warning: Age_Computation.Rd:80: missing link ‘jags.model’ Rd warning: Age_Computation.Rd:82: missing link ‘rjags’ Rd warning: Age_Computation.Rd:197: missing link ‘rjags’ Rd warning: Age_OSLC14.Rd:164: missing link ‘rjags’ Rd warning: Age_OSLC14.Rd:395: missing link ‘runjags’ Rd warning: Generate_DataFile-deprecated.Rd:143: missing link ‘read_BIN2R’ Rd warning: Generate_DataFile-deprecated.Rd:143: missing link ‘Luminescence’ Rd warning: Generate_DataFile-deprecated.Rd:167: missing link ‘read_BIN2R’ Rd warning: Generate_DataFile_MG-deprecated.Rd:178: missing link ‘read_BIN2R’ Rd warning: Model_Age.Rd:36: missing link ‘rjags’ Rd warning: Model_AgeC14.Rd:31: missing link ‘rjags’ Rd warning: Model_AgeS.Rd:35: missing link ‘rjags’ Rd warning: Model_Palaeodose.Rd:37: missing link ‘rjags’ Rd warning: Palaeodose_Computation.Rd:64: missing link ‘jags.model’ Rd warning: Palaeodose_Computation.Rd:67: missing link ‘jags.model’ Rd warning: Palaeodose_Computation.Rd:69: missing link ‘jags.model’ Rd warning: Palaeodose_Computation.Rd:177: missing link ‘rjags’ Rd warning: create_DataFile.Rd:35: missing link ‘RLum.Analysis-class’ Rd warning: plot_MCMC.Rd:78: missing link ‘rjags’ Rd warning: plot_Scatterplots.Rd:109: missing link ‘rjags’ Flavor: r-patched-linux-x86_64

Package RChronoModel

Current CRAN status: NOTE: 6, OK: 9

Version: 0.4
Check: for non-standard things in the check directory
Result: NOTE Found the following files/directories: ‘data.csv’ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64