CRAN Package Check Results for Package gaawr2

Last updated on 2025-03-28 05:52:12 CET.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	0.0.2	9.45	187.42	196.87	OK
r-devel-linux-x86_64-debian-gcc	0.0.3	6.74	145.21	151.95	OK
r-devel-linux-x86_64-fedora-clang	0.0.3			316.14	OK
r-devel-linux-x86_64-fedora-gcc	0.0.3			317.74	OK
r-devel-macos-arm64	0.0.3			95.00	ERROR
r-devel-macos-x86_64	0.0.3			153.00	ERROR
r-devel-windows-x86_64	0.0.3	9.00	191.00	200.00	OK
r-patched-linux-x86_64	0.0.3	9.45	185.75	195.20	OK
r-release-linux-x86_64	0.0.3	8.93	180.81	189.74	OK
r-release-macos-arm64	0.0.3			99.00	ERROR
r-release-macos-x86_64	0.0.3			168.00	ERROR
r-release-windows-x86_64	0.0.3	11.00	192.00	203.00	OK
r-oldrel-macos-arm64				59.00	FAIL
r-oldrel-macos-x86_64	0.0.3			155.00	ERROR
r-oldrel-windows-x86_64	0.0.3	13.00	219.00	232.00	ERROR

Check Details

Version: 0.0.3
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘gaawr2.Rmd’ using rmarkdown Failed with error: 'there is no package called 'EnsDb.Hsapiens.v75'' running: bash -c "export message=\"Hello, world!\" echo \"print('\$message')\" > hello.R R CMD BATCH hello.R R --no-save -q < hello.R R --no-save -q <<END message <- Sys.getenv(\"message\"); print(message) source(\"hello.R\") END echo \${message} | \\ Rscript -e ' message <- scan(\"stdin\", what=\"\", sep=\"\\n\", quiet=TRUE); write.table(message, col.names=FALSE, row.names=FALSE, quote=FALSE) ' | \\ cat rm hello.*" Quitting from gaawr2.Rmd:409-415 [ensdb] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `h()`: ! error in evaluating the argument 'x' in selecting a method for function 'metadata': object 'EnsDb.Hsapiens.v75' not found --- Backtrace: ▆ 1. ├─ensembldb::metadata(EnsDb.Hsapiens.v75) 2. └─base::.handleSimpleError(...) 3. └─base (local) h(simpleError(msg, call)) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'gaawr2.Rmd' failed with diagnostics: error in evaluating the argument 'x' in selecting a method for function 'metadata': object 'EnsDb.Hsapiens.v75' not found --- failed re-building ‘gaawr2.Rmd’ --- re-building ‘web.Rmd’ using rmarkdown [WARNING] Citeproc: citation tsv not found --- finished re-building ‘web.Rmd’ SUMMARY: processing the following file failed: ‘gaawr2.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-macos-arm64, r-devel-macos-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 0.0.3
Check: package dependencies
Result: NOTE Package suggested but not available for checking: ‘EnsDb.Hsapiens.v75’ Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 0.0.3
Check: re-building of vignette outputs
Result: FAIL
Flavor: r-oldrel-macos-arm64

Version: 0.0.3
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'gaawr2.Rmd' using rmarkdown Failed with error: 'there is no package called 'EnsDb.Hsapiens.v75'' running: bash -c "export message=\"Hello, world!\" echo \"print('$message')\" > hello.R R CMD BATCH hello.R R --no-save -q < hello.R R --no-save -q <<END message <- Sys.getenv(\"message\"); print(message) source(\"hello.R\") END echo ${message} | \ Rscript -e ' message <- scan(\"stdin\", what=\"\", sep=\"\n\", quiet=TRUE); write.table(message, col.names=FALSE, row.names=FALSE, quote=FALSE) ' | \ cat rm hello.*" Quitting from gaawr2.Rmd:409-415 [ensdb] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `h()`: ! error in evaluating the argument 'x' in selecting a method for function 'metadata': object 'EnsDb.Hsapiens.v75' not found --- Backtrace: ▆ 1. ├─ensembldb::metadata(EnsDb.Hsapiens.v75) 2. └─base::.handleSimpleError(...) 3. └─base (local) h(simpleError(msg, call)) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'gaawr2.Rmd' failed with diagnostics: error in evaluating the argument 'x' in selecting a method for function 'metadata': object 'EnsDb.Hsapiens.v75' not found --- failed re-building 'gaawr2.Rmd' --- re-building 'web.Rmd' using rmarkdown [WARNING] Citeproc: citation tsv not found --- finished re-building 'web.Rmd' SUMMARY: processing the following file failed: 'gaawr2.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-oldrel-windows-x86_64