CRAN Package Check Results for Package ggsurvfit

Last updated on 2026-10-24 17:51:33 CEST.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	1.2.1	11.14	438.53	449.67	OK
r-devel-linux-x86_64-debian-gcc	1.2.1	9.14	295.33	304.47	ERROR
r-devel-linux-x86_64-fedora-clang	1.2.1	9.00	302.74	311.74	OK
r-devel-linux-x86_64-fedora-gcc	1.2.1	8.00	281.54	289.54	OK
r-devel-windows-x86_64	1.2.1	13.00	383.00	396.00	OK
r-patched-linux-x86_64	1.2.1	10.86	408.93	419.79	OK
r-release-linux-x86_64	1.2.1	11.76	405.39	417.15	OK
r-release-macos-arm64	1.2.1	3.00	99.00	102.00	OK
r-release-macos-x86_64	1.2.1	9.00	611.00	620.00	OK
r-release-windows-x86_64	1.2.1	13.00	363.00	376.00	OK
r-oldrel-macos-arm64	1.2.1	3.00	104.00	107.00	OK
r-oldrel-macos-x86_64	1.2.1	9.00	709.00	718.00	OK
r-oldrel-windows-x86_64	1.2.1	19.00	500.00	519.00	OK

Check Details

Version: 1.2.1
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [184s/205s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(ggsurvfit) Loading required package: ggplot2 > > test_check("ggsurvfit") Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". ! `add_pvalue()` works with objects created with `survfit2()` or `tidycmprsk::cuminc()`. i `add_pvalue()` has been ignored. Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Saving _problems/test-add_risktable-286.R ! Setting start time to -9.83572895277207. i Specify `ggsurvfit::survfit2(start.time)` to override this default. Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Plotting outcome "death from cancer". Saving _problems/test-ggcuminc-115.R Plotting outcome "death from cancer". Saving 7 x 7 in image Saving 7 x 7 in image ! Setting start time to -499.835728952772. i Specify `ggsurvfit::survfit2(start.time)` to override this default. [ FAIL 2 | WARN 0 | SKIP 28 | PASS 277 ] ══ Skipped tests (28) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test-add_censor_mark.R:5:1', 'test-add_censor_mark.R:33:1', 'test-add_censor_mark.R:48:1', 'test-add_confidence_interval.R:5:1', 'test-add_confidence_interval.R:55:1', 'test-add_confidence_interval.R:69:1', 'test-add_pvalue.R:1:1', 'test-add_pvalue.R:133:1', 'test-add_quantile.R:5:1', 'test-add_quantile.R:150:1', 'test-add_quantile.R:165:1', 'test-add_quantile.R:179:1', 'test-add_risktable.R:5:1', 'test-add_risktable.R:150:1', 'test-add_risktable.R:193:1', 'test-add_risktable.R:234:1', 'test-add_risktable.R:315:1', 'test-add_risktable_strata_symbol.R:1:1', 'test-ggcuminc.R:9:1', 'test-ggcuminc.R:46:1', 'test-ggsurvfit.R:5:1', 'test-ggsurvfit.R:142:1', 'test-ggsurvfit.R:188:1', 'test-ggsurvfit_options.R:1:1', 'test-stat_stepribbon.R:1:1', 'test-survfit2_p.R:31:1', 'test-theme_risktable.R:5:1', 'test-tidy_survfit.R:209:1' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-add_risktable.R:284:3'): add_risktable() works with Cox models ── <subscriptOutOfBoundsError/error/condition> Error in `a$specials[[i]]`: subscript out of bounds Backtrace: ▆ 1. ├─... %>% survfit2() at test-add_risktable.R:284:3 2. └─ggsurvfit::survfit2(.) 3. └─base::eval(call, parent.frame()) 4. └─base::eval(call, parent.frame()) 5. ├─survival::survfit(formula = .) 6. └─survival:::survfit.coxph(formula = .) 7. └─survival:::model.matrix.coxph(object, data = mf) 8. └─stats::delete.response(object$terms) 9. └─stats (local) off(a$specials[[i]]) ── Error ('test-ggcuminc.R:115:3'): ggcuminc() throws error with survfit.coxphms objects ── <subscriptOutOfBoundsError/error/condition> Error in `a$specials[[i]]`: subscript out of bounds Backtrace: ▆ 1. ├─survival::survfit(cox_model, newdata = newdata) at test-ggcuminc.R:115:3 2. └─survival:::survfit.coxphms(cox_model, newdata = newdata) 3. ├─stats::model.matrix(object, data = mf) 4. └─survival:::model.matrix.coxph(object, data = mf) 5. └─stats::delete.response(object$terms) 6. └─stats (local) off(a$specials[[i]]) [ FAIL 2 | WARN 0 | SKIP 28 | PASS 277 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc