Last updated on 2025-05-08 04:52:35 CEST.
| Package | ERROR | OK |
|---|---|---|
| CAST | 1 | 12 |
Current CRAN status: ERROR: 1, OK: 12
Version: 1.0.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘cast01-CAST-intro.Rmd’ using rmarkdown
CAST package:CAST R Documentation
'_<08>c_<08>a_<08>r_<08>e_<08>t' _<08>A_<08>p_<08>p_<08>l_<08>i_<08>c_<08>a_<08>t_<08>i_<08>o_<08>n_<08>s _<08>f_<08>o_<08>r _<08>S_<08>p_<08>a_<08>t_<08>i_<08>a_<08>l-_<08>T_<08>e_<08>m_<08>p_<08>o_<08>r_<08>a_<08>l _<08>M_<08>o_<08>d_<08>e_<08>l_<08>s
_<08>D_<08>e_<08>s_<08>c_<08>r_<08>i_<08>p_<08>t_<08>i_<08>o_<08>n:
Supporting functionality to run 'caret' with spatial or
spatial-temporal data. 'caret' is a frequently used package for
model training and prediction using machine learning. CAST
includes functions to improve spatial-temporal modelling tasks
using 'caret'. It includes the newly suggested 'Nearest neighbor
distance matching' cross-validation to estimate the performance of
spatial prediction models and allows for spatial variable
selection to selects suitable predictor variables in view to their
contribution to the spatial model performance. CAST further
includes functionality to estimate the (spatial) area of
applicability of prediction models by analysing the similarity
between new data and training data. Methods are described in Meyer
et al. (2018); Meyer et al. (2019); Meyer and Pebesma (2021); Milà
et al. (2022); Meyer and Pebesma (2022); Linnenbrink et al.
(2023). The package is described in detail in Meyer et al. (2024).
_<08>D_<08>e_<08>t_<08>a_<08>i_<08>l_<08>s:
'caret' Applications for Spatio-Temporal models
_<08>A_<08>u_<08>t_<08>h_<08>o_<08>r(_<08>s):
Hanna Meyer, Carles Milà, Marvin Ludwig, Jan Linnenbrink, Fabian
Schumacher
_<08>R_<08>e_<08>f_<08>e_<08>r_<08>e_<08>n_<08>c_<08>e_<08>s:
• Meyer, H., Ludwig, L., Milà, C., Linnenbrink, J., Schumacher,
F. (2024): The CAST package for training and assessment of
spatial prediction models in R. arXiv,
https://doi.org/10.48550/arXiv.2404.06978.
• Linnenbrink, J., Milà, C., Ludwig, M., and Meyer, H.: kNNDM:
k-fold Nearest Neighbour Distance Matching Cross-Validation
for map accuracy estimation, EGUsphere [preprint],
https://doi.org/10.5194/egusphere-2023-1308, 2023.
• Milà, C., Mateu, J., Pebesma, E., Meyer, H. (2022): Nearest
Neighbour Distance Matching Leave-One-Out Cross-Validation
for map validation. Methods in Ecology and Evolution 00, 1–
13.
• Meyer, H., Pebesma, E. (2022): Machine learning-based global
maps of ecological variables and the challenge of assessing
them. Nature Communications. 13.
• Meyer, H., Pebesma, E. (2021): Predicting into unknown space?
Estimating the area of applicability of spatial prediction
models. Methods in Ecology and Evolution. 12, 1620– 1633.
• Meyer, H., Reudenbach, C., Wöllauer, S., Nauss, T. (2019):
Importance of spatial predictor variable selection in machine
learning applications - Moving from data reproduction to
spatial prediction. Ecological Modelling. 411, 108815.
• Meyer, H., Reudenbach, C., Hengl, T., Katurji, M., Nauß, T.
(2018): Improving performance of spatio-temporal machine
learning models using forward feature selection and
target-oriented validation. Environmental Modelling &
Software 101: 1-9.
_<08>S_<08>e_<08>e _<08>A_<08>l_<08>s_<08>o:
Useful links:
• <https://github.com/HannaMeyer/CAST>
• <https://hannameyer.github.io/CAST/>
• Report bugs at <https://github.com/HannaMeyer/CAST/issues/>
trying URL 'https://geodata.ucdavis.edu/climate/worldclim/2_1/base/wc2.1_10m_bio.zip'
Content type 'application/zip' length 49869449 bytes (47.6 MB)
==================================================
downloaded 47.6 MB
trying URL 'https://geodata.ucdavis.edu/climate/worldclim/2_1/base/wc2.1_10m_elev.zip'
Content type 'application/zip' length 1332437 bytes (1.3 MB)
==================================================
downloaded 1.3 MB
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast01-CAST-intro_files/figure-html/unnamed-chunk-6-1.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 35564 bytes
Input file size = 35690 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 31123
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 31123
Output IDAT size = 31123 bytes (4441 bytes decrease)
Output file size = 31201 bytes (4489 bytes = 12.58% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast01-CAST-intro_files/figure-html/unnamed-chunk-8-1.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33631 bytes
Input file size = 33757 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25033
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25033
Output IDAT size = 25033 bytes (8598 bytes decrease)
Output file size = 25111 bytes (8646 bytes = 25.61% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast01-CAST-intro_files/figure-html/unnamed-chunk-12-1.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33701 bytes
Input file size = 33827 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28299
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28299
Output IDAT size = 28299 bytes (5402 bytes decrease)
Output file size = 28377 bytes (5450 bytes = 16.11% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast01-CAST-intro_files/figure-html/unnamed-chunk-12-2.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33969 bytes
Input file size = 34095 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 29138
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 29138
Output IDAT size = 29138 bytes (4831 bytes decrease)
Output file size = 29216 bytes (4879 bytes = 14.31% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast01-CAST-intro_files/figure-html/unnamed-chunk-12-3.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34003 bytes
Input file size = 34129 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28752
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28752
Output IDAT size = 28752 bytes (5251 bytes decrease)
Output file size = 28830 bytes (5299 bytes = 15.53% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast01-CAST-intro_files/figure-html/unnamed-chunk-14-1.png
847x288 pixels, 8 bits/pixel, 255 colors in palette
Input IDAT size = 5589 bytes
Input file size = 6444 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5092
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5092
Output IDAT size = 5092 bytes (497 bytes decrease)
Output file size = 5947 bytes (497 bytes = 7.71% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast01-CAST-intro_files/figure-html/unnamed-chunk-16-1.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 32155 bytes
Input file size = 32269 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26027
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26027
Output IDAT size = 26027 bytes (6128 bytes decrease)
Output file size = 26105 bytes (6164 bytes = 19.10% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast01-CAST-intro_files/figure-html/unnamed-chunk-17-1.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 36297 bytes
Input file size = 36423 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26692
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26692
Output IDAT size = 26692 bytes (9605 bytes decrease)
Output file size = 26770 bytes (9653 bytes = 26.50% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast01-CAST-intro_files/figure-html/unnamed-chunk-18-1.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 10003 bytes
Input file size = 10093 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8687
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 8687
Output IDAT size = 8687 bytes (1316 bytes decrease)
Output file size = 8765 bytes (1328 bytes = 13.16% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast01-CAST-intro_files/figure-html/unnamed-chunk-19-1.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 61854 bytes
Input file size = 62016 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 44667
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 44667
Output IDAT size = 44667 bytes (17187 bytes decrease)
Output file size = 44745 bytes (17271 bytes = 27.85% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast01-CAST-intro_files/figure-html/unnamed-chunk-19-2.png
847x288 pixels, 8 bits/pixel, 254 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 8546 bytes
Input file size = 9410 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7493
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7493
Output IDAT size = 7493 bytes (1053 bytes decrease)
Output file size = 7571 bytes (1839 bytes = 19.54% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast01-CAST-intro_files/figure-html/unnamed-chunk-19-3.png
847x288 pixels, 8 bits/pixel, 255 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 8396 bytes
Input file size = 9263 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7353
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7353
Output IDAT size = 7353 bytes (1043 bytes decrease)
Output file size = 7431 bytes (1832 bytes = 19.78% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast01-CAST-intro_files/figure-html/unnamed-chunk-20-1.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 32750 bytes
Input file size = 32864 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23003
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23003
Output IDAT size = 23003 bytes (9747 bytes decrease)
Output file size = 23081 bytes (9783 bytes = 29.77% decrease)
--- finished re-building ‘cast01-CAST-intro.Rmd’
--- re-building ‘cast02-plotgeodist.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast02-plotgeodist_files/figure-html/unnamed-chunk-4-1.png
595x326 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 49989 bytes
Input file size = 50139 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 35164
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 35164
Output IDAT size = 35164 bytes (14825 bytes decrease)
Output file size = 35242 bytes (14897 bytes = 29.71% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast02-plotgeodist_files/figure-html/unnamed-chunk-5-1.png
595x326 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 45401 bytes
Input file size = 45539 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 32754
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 32754
Output IDAT size = 32754 bytes (12647 bytes decrease)
Output file size = 32832 bytes (12707 bytes = 27.90% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast02-plotgeodist_files/figure-html/unnamed-chunk-6-1.png
595x326 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 27257 bytes
Input file size = 27371 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23273
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23273
Output IDAT size = 23273 bytes (3984 bytes decrease)
Output file size = 23351 bytes (4020 bytes = 14.69% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast02-plotgeodist_files/figure-html/unnamed-chunk-6-2.png
595x326 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 26431 bytes
Input file size = 26545 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22231
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22231
Output IDAT size = 22231 bytes (4200 bytes decrease)
Output file size = 22309 bytes (4236 bytes = 15.96% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast02-plotgeodist_files/figure-html/unnamed-chunk-8-1.png
595x326 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 49033 bytes
Input file size = 49171 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 36149
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 36149
Output IDAT size = 36149 bytes (12884 bytes decrease)
Output file size = 36227 bytes (12944 bytes = 26.32% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast02-plotgeodist_files/figure-html/unnamed-chunk-9-1.png
595x326 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 28787 bytes
Input file size = 28901 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24327
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24327
Output IDAT size = 24327 bytes (4460 bytes decrease)
Output file size = 24405 bytes (4496 bytes = 15.56% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast02-plotgeodist_files/figure-html/unnamed-chunk-11-1.png
595x326 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 48500 bytes
Input file size = 48638 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 35470
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 35470
Output IDAT size = 35470 bytes (13030 bytes decrease)
Output file size = 35548 bytes (13090 bytes = 26.91% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast02-plotgeodist_files/figure-html/unnamed-chunk-12-1.png
595x326 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 30344 bytes
Input file size = 30458 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25283
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25283
Output IDAT size = 25283 bytes (5061 bytes decrease)
Output file size = 25361 bytes (5097 bytes = 16.73% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast02-plotgeodist_files/figure-html/unnamed-chunk-13-1.png
595x326 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 52149 bytes
Input file size = 52299 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 37639
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 37639
Output IDAT size = 37639 bytes (14510 bytes decrease)
Output file size = 37717 bytes (14582 bytes = 27.88% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast02-plotgeodist_files/figure-html/unnamed-chunk-14-1.png
595x326 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 29635 bytes
Input file size = 29749 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25107
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25107
Output IDAT size = 25107 bytes (4528 bytes decrease)
Output file size = 25185 bytes (4564 bytes = 15.34% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast02-plotgeodist_files/figure-html/unnamed-chunk-15-1.png
595x326 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 29702 bytes
Input file size = 29816 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24905
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24905
Output IDAT size = 24905 bytes (4797 bytes decrease)
Output file size = 24983 bytes (4833 bytes = 16.21% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast02-plotgeodist_files/figure-html/unnamed-chunk-16-1.png
595x326 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 30754 bytes
Input file size = 30868 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26072
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26072
Output IDAT size = 26072 bytes (4682 bytes decrease)
Output file size = 26150 bytes (4718 bytes = 15.28% decrease)
trying URL 'https://geodata.ucdavis.edu/climate/worldclim/2_1/base/wc2.1_10m_bio.zip'
Content type 'application/zip' length 49869449 bytes (47.6 MB)
==================================================
downloaded 47.6 MB
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast02-plotgeodist_files/figure-html/unnamed-chunk-17-1.png
595x326 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 64145 bytes
Input file size = 64307 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42333
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42333
Output IDAT size = 42333 bytes (21812 bytes decrease)
Output file size = 42411 bytes (21896 bytes = 34.05% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast02-plotgeodist_files/figure-html/unnamed-chunk-18-1.png
595x326 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33444 bytes
Input file size = 33570 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27519
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27519
Output IDAT size = 27519 bytes (5925 bytes decrease)
Output file size = 27597 bytes (5973 bytes = 17.79% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast02-plotgeodist_files/figure-html/unnamed-chunk-18-2.png
595x326 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 35702 bytes
Input file size = 35828 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 29481
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 29481
Output IDAT size = 29481 bytes (6221 bytes decrease)
Output file size = 29559 bytes (6269 bytes = 17.50% decrease)
--- finished re-building ‘cast02-plotgeodist.Rmd’
--- re-building ‘cast03-CV.Rmd’ using rmarkdown
Quitting from cast03-CV.Rmd:38-64 [read data]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! Cannot open "https://github.com/carlesmila/RF-spatial-proxies/raw/main/data/boundaries/spain.gpkg"; The file doesn't seem to exist.
---
Backtrace:
▆
1. └─sf::read_sf("https://github.com/carlesmila/RF-spatial-proxies/raw/main/data/boundaries/spain.gpkg")
2. ├─sf::st_read(...)
3. └─sf:::st_read.character(...)
4. └─sf:::CPL_read_ogr(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'cast03-CV.Rmd' failed with diagnostics:
Cannot open "https://github.com/carlesmila/RF-spatial-proxies/raw/main/data/boundaries/spain.gpkg"; The file doesn't seem to exist.
--- failed re-building ‘cast03-CV.Rmd’
--- re-building ‘cast04-AOA-tutorial.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-3-1.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 99003 bytes
Input file size = 99225 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 70471
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 70471
Output IDAT size = 70471 bytes (28532 bytes decrease)
Output file size = 70549 bytes (28676 bytes = 28.90% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-5-1.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 32471 bytes
Input file size = 32585 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23637
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23637
Output IDAT size = 23637 bytes (8834 bytes decrease)
Output file size = 23715 bytes (8870 bytes = 27.22% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-7-1.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 32377 bytes
Input file size = 32491 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23909
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23909
Output IDAT size = 23909 bytes (8468 bytes decrease)
Output file size = 23987 bytes (8504 bytes = 26.17% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-10-1.png
847x288 pixels, 8 bits/pixel, 249 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 4146 bytes
Input file size = 4983 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 3636
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3605
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 3605
Output IDAT size = 3605 bytes (541 bytes decrease)
Output file size = 3683 bytes (1300 bytes = 26.09% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-11-1.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 59508 bytes
Input file size = 59670 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 41757
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 41757
Output IDAT size = 41757 bytes (17751 bytes decrease)
Output file size = 41835 bytes (17835 bytes = 29.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-13-1.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 21063 bytes
Input file size = 21165 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18288
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18288
Output IDAT size = 18288 bytes (2775 bytes decrease)
Output file size = 18366 bytes (2799 bytes = 13.22% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-14-1.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 32634 bytes
Input file size = 32748 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22682
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22682
Output IDAT size = 22682 bytes (9952 bytes decrease)
Output file size = 22760 bytes (9988 bytes = 30.50% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-14-2.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 27577 bytes
Input file size = 27691 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19431
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19431
Output IDAT size = 19431 bytes (8146 bytes decrease)
Output file size = 19509 bytes (8182 bytes = 29.55% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-14-3.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 21763 bytes
Input file size = 21865 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15159
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15159
Output IDAT size = 15159 bytes (6604 bytes decrease)
Output file size = 15237 bytes (6628 bytes = 30.31% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-14-4.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 15718 bytes
Input file size = 15808 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13190
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13190
Output IDAT size = 13190 bytes (2528 bytes decrease)
Output file size = 13268 bytes (2540 bytes = 16.07% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-15-1.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 35409 bytes
Input file size = 35535 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26675
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26675
Output IDAT size = 26675 bytes (8734 bytes decrease)
Output file size = 26753 bytes (8782 bytes = 24.71% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-20-1.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31101 bytes
Input file size = 31215 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21600
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21600
Output IDAT size = 21600 bytes (9501 bytes decrease)
Output file size = 21678 bytes (9537 bytes = 30.55% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-20-2.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 29668 bytes
Input file size = 29782 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19385
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19385
Output IDAT size = 19385 bytes (10283 bytes decrease)
Output file size = 19463 bytes (10319 bytes = 34.65% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-20-3.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 15650 bytes
Input file size = 15740 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13169
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13169
Output IDAT size = 13169 bytes (2481 bytes decrease)
Output file size = 13247 bytes (2493 bytes = 15.84% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-20-4.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 18185 bytes
Input file size = 18287 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15286
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15286
Output IDAT size = 15286 bytes (2899 bytes decrease)
Output file size = 15364 bytes (2923 bytes = 15.98% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-21-1.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 39887 bytes
Input file size = 40013 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 32162
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 32162
Output IDAT size = 32162 bytes (7725 bytes decrease)
Output file size = 32240 bytes (7773 bytes = 19.43% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-23-1.png
847x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 8861 bytes
Input file size = 9731 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7983
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 7974
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 7974
Output IDAT size = 7974 bytes (887 bytes decrease)
Output file size = 8052 bytes (1679 bytes = 17.25% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-23-2.png
847x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 7607 bytes
Input file size = 8465 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6771
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6771
Output IDAT size = 6771 bytes (836 bytes decrease)
Output file size = 6849 bytes (1616 bytes = 19.09% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-23-3.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 17781 bytes
Input file size = 17883 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14803
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14803
Output IDAT size = 14803 bytes (2978 bytes decrease)
Output file size = 14881 bytes (3002 bytes = 16.79% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-23-4.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16897 bytes
Input file size = 16999 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14112
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14112
Output IDAT size = 14112 bytes (2785 bytes decrease)
Output file size = 14190 bytes (2809 bytes = 16.52% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-26-1.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 53827 bytes
Input file size = 53977 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 41331
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 41331
Output IDAT size = 41331 bytes (12496 bytes decrease)
Output file size = 41409 bytes (12568 bytes = 23.28% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-27-1.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34981 bytes
Input file size = 35107 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27113
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27113
Output IDAT size = 27113 bytes (7868 bytes decrease)
Output file size = 27191 bytes (7916 bytes = 22.55% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-27-2.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 32916 bytes
Input file size = 33042 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24758
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24758
Output IDAT size = 24758 bytes (8158 bytes decrease)
Output file size = 24836 bytes (8206 bytes = 24.84% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast04-AOA-tutorial_files/figure-html/unnamed-chunk-27-3.png
847x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 17050 bytes
Input file size = 17152 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14815
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14815
Output IDAT size = 14815 bytes (2235 bytes decrease)
Output file size = 14893 bytes (2259 bytes = 13.17% decrease)
--- finished re-building ‘cast04-AOA-tutorial.Rmd’
--- re-building ‘cast05-parallel.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast05-parallel_files/figure-html/unnamed-chunk-5-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16965 bytes
Input file size = 17067 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11913
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11913
Output IDAT size = 11913 bytes (5052 bytes decrease)
Output file size = 11991 bytes (5076 bytes = 29.74% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast05-parallel_files/figure-html/unnamed-chunk-5-2.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 20788 bytes
Input file size = 20890 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13999
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13999
Output IDAT size = 13999 bytes (6789 bytes decrease)
Output file size = 14077 bytes (6813 bytes = 32.61% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast05-parallel_files/figure-html/unnamed-chunk-5-3.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 18459 bytes
Input file size = 18561 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12516
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12516
Output IDAT size = 12516 bytes (5943 bytes decrease)
Output file size = 12594 bytes (5967 bytes = 32.15% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast05-parallel_files/figure-html/unnamed-chunk-6-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 18493 bytes
Input file size = 18595 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13146
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 13146
Output IDAT size = 13146 bytes (5347 bytes decrease)
Output file size = 13224 bytes (5371 bytes = 28.88% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast05-parallel_files/figure-html/unnamed-chunk-6-2.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 22602 bytes
Input file size = 22704 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16937
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16937
Output IDAT size = 16937 bytes (5665 bytes decrease)
Output file size = 17015 bytes (5689 bytes = 25.06% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast05-parallel_files/figure-html/unnamed-chunk-6-3.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 6094 bytes
Input file size = 6172 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4911
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4911
Output IDAT size = 4911 bytes (1183 bytes decrease)
Output file size = 4989 bytes (1183 bytes = 19.17% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast05-parallel_files/figure-html/unnamed-chunk-9-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 5373 bytes
Input file size = 5451 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4295
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 4295
Output IDAT size = 4295 bytes (1078 bytes decrease)
Output file size = 4373 bytes (1078 bytes = 19.78% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast05-parallel_files/figure-html/unnamed-chunk-9-2.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 7437 bytes
Input file size = 7515 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5681
Output IDAT size = 5681 bytes (1756 bytes decrease)
Output file size = 5759 bytes (1756 bytes = 23.37% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/CAST.Rcheck/vign_test/CAST/vignettes/cast05-parallel_files/figure-html/unnamed-chunk-9-3.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 7828 bytes
Input file size = 7906 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5925
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5925
Output IDAT size = 5925 bytes (1903 bytes decrease)
Output file size = 6003 bytes (1903 bytes = 24.07% decrease)
--- finished re-building ‘cast05-parallel.Rmd’
SUMMARY: processing the following file failed:
‘cast03-CV.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.