CRAN Package Check Results for Maintainer ‘Housen Chu <hchu at lbl.gov>’

Last updated on 2025-01-30 16:48:50 CET.

Package	ERROR	OK
amerifluxr	2	11

Package amerifluxr

Current CRAN status: ERROR: 2, OK: 11

Version: 1.0.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'data_import.Rmd' using rmarkdown Quitting from lines 167-170 [unnamed-chunk-6] (data_import.Rmd) Error: processing vignette 'data_import.Rmd' failed with diagnostics: cannot open the connection to 'https://amfcdn.lbl.gov//api/v1/fp_var?limits=True' --- failed re-building 'data_import.Rmd' --- re-building 'site_selection.Rmd' using rmarkdown Quitting from lines 47-53 [unnamed-chunk-2] (site_selection.Rmd) Error: processing vignette 'site_selection.Rmd' failed with diagnostics: cannot open the connection to 'https://amfcdn.lbl.gov//api/v1/site_display/AmeriFlux' --- failed re-building 'site_selection.Rmd' SUMMARY: processing the following files failed: 'data_import.Rmd' 'site_selection.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-devel-windows-x86_64

Version: 1.0.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘data_import.Rmd’ using rmarkdown trying URL 'ftp://ftp.fluxdata.org/.ameriflux_downloads/measurement_height//BASE_MeasurementHeight_20241204.csv' Content type 'unknown' length 1642083 bytes (1.6 MB) ================================================== ** Processing: /home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/amerifluxr.Rcheck/vign_test/amerifluxr/vignettes/data_import_files/figure-html/unnamed-chunk-12-1.png 672x288 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7951 bytes Input file size = 8809 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7217 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 7217 Output IDAT size = 7217 bytes (734 bytes decrease) Output file size = 7295 bytes (1514 bytes = 17.19% decrease) --- finished re-building ‘data_import.Rmd’ --- re-building ‘site_selection.Rmd’ using rmarkdown Quitting from lines 252-257 [unnamed-chunk-12] (site_selection.Rmd) Error: processing vignette 'site_selection.Rmd' failed with diagnostics: cannot open the connection to 'https://raw.githubusercontent.com/chuhousen/amerifluxr/master/data-summary/AMF_AA-Flx_BASE_VARIABLE-SUMMARY_LATEST.csv' --- failed re-building ‘site_selection.Rmd’ SUMMARY: processing the following file failed: ‘site_selection.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-patched-linux-x86_64