CRAN Package Check Results for Package irlba

Last updated on 2025-02-02 19:48:23 CET.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	2.3.5.1	8.04	70.41	78.45	NOTE
r-devel-linux-x86_64-debian-gcc	2.3.5.1	6.44	54.47	60.91	NOTE
r-devel-linux-x86_64-fedora-clang	2.3.5.1			125.63	NOTE
r-devel-linux-x86_64-fedora-gcc	2.3.5.1			135.08	NOTE
r-devel-windows-x86_64	2.3.5.1	11.00	0.00	11.00	FAIL
r-patched-linux-x86_64	2.3.5.1	8.37	69.40	77.77	NOTE
r-release-linux-x86_64	2.3.5.1	7.91	69.78	77.69	NOTE
r-release-macos-arm64	2.3.5.1			46.00	NOTE
r-release-macos-x86_64	2.3.5.1			82.00	NOTE
r-release-windows-x86_64	2.3.5.1	12.00	96.00	108.00	NOTE
r-oldrel-macos-arm64	2.3.5.1			34.00	ERROR
r-oldrel-macos-x86_64	2.3.5.1			74.00	OK
r-oldrel-windows-x86_64	2.3.5.1	13.00	108.00	121.00	OK

Check Details

Version: 2.3.5.1
Check: Rd files
Result: NOTE checkRd: (-1) partial_eigen.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) partial_eigen.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) prcomp_irlba.Rd:41-44: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) prcomp_irlba.Rd:45-46: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) prcomp_irlba.Rd:47-50: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) prcomp_irlba.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ssvd.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ssvd.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ssvd.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ssvd.Rd:55: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ssvd.Rd:56: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ssvd.Rd:57: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ssvd.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) ssvd.Rd:59: Lost braces in \itemize; \value handles \item{}{} directly Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Version: 2.3.5.1
Check: PDF version of manual
Result: FAIL Check process probably crashed or hung up for 20 minutes ... killed Most likely this happened in the example checks (?), if not, ignore the following last lines of example output: > ##D # (This example based on https://github.com/bwlewis/irlba/issues/16.) > ##D set.seed(1) > ##D s <- svd(matrix(rnorm(200 * 200), 200)) > ##D x <- s$u %*% (c(exp(-(1:100)^0.3) * 1e-12 + 1, rep(0.5, 100)) * t(s$v)) > ##D tL <- system.time(L <- irlba(x, 5)) > ##D tR <- system.time(R <- svdr(x, 5)) > ##D S <- svd(x) > ##D plot(S$d) > ##D data.frame(time=c(tL[3], tR[3]), > ##D error=sqrt(c(crossprod(L$d - S$d[1:5]), crossprod(R$d - S$d[1:5]))), > ##D row.names=c("IRLBA", "Randomized SVD")) > ## End(Not run) > > > > ### * <FOOTER> > ### > cleanEx() > options(digits = 7L) > base::cat("Time elapsed: ", proc.time() - base::get("ptime", pos = 'CheckExEnv'),"\n") Time elapsed: 2.08 0.09 2.17 NA NA > grDevices::dev.off() null device 1 > ### > ### Local variables: *** > ### mode: outline-minor *** > ### outline-regexp: "\\(> \\)?### [*]+" *** > ### End: *** > quit('no') ======== End of example output (where/before crash/hang up occured ?) ======== Flavor: r-devel-windows-x86_64

Version: 2.3.5.1
Check: tests
Result: ERROR Running ‘edge.R’ [1s/1s] Running ‘prcomp.r’ [1s/1s] Running ‘ssvd.R’ [1s/1s] Running ‘svdr.R’ [1s/1s] Running ‘test.R’ [1s/1s] Running the tests in ‘tests/test.R’ failed. Last 13 lines of output: + + # test for https://github.com/bwlewis/irlba/issues/42 + set.seed(1234) + a <- matrix(rnorm(10000), ncol=20) + center <- runif(ncol(a)) + scale <- runif(ncol(a)) + L <- irlba(a, 5, scale=scale, center=center, fastpath=FAST) + S <- svd(scale(a, center=center, scale=scale)) + if (isTRUE(max(abs(S$d[1:5] - L$d)) > 1e-3)) + { + stop("Failed scale + center test fastpath=", FAST) + } + } Error: Failed tprolate test fastpath=FALSE Execution halted Flavor: r-oldrel-macos-arm64