Last updated on 2025-06-12 19:50:08 CEST.
Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
---|---|---|---|---|---|---|
r-devel-linux-x86_64-debian-clang | 1.2.0 | 4.18 | 70.94 | 75.12 | OK | |
r-devel-linux-x86_64-debian-gcc | 1.2.0 | 3.24 | 32.55 | 35.79 | ERROR | |
r-devel-linux-x86_64-fedora-clang | 1.2.0 | 123.16 | OK | |||
r-devel-linux-x86_64-fedora-gcc | 1.2.0 | 112.34 | OK | |||
r-devel-windows-x86_64 | 1.2.0 | 6.00 | 112.00 | 118.00 | OK | |
r-patched-linux-x86_64 | 1.2.0 | 3.98 | 60.49 | 64.47 | OK | |
r-release-linux-x86_64 | 1.2.0 | 3.99 | 60.58 | 64.57 | OK | |
r-release-macos-arm64 | 1.2.0 | 53.00 | OK | |||
r-release-macos-x86_64 | 1.2.0 | 220.00 | OK | |||
r-release-windows-x86_64 | 1.2.0 | 6.00 | 115.00 | 121.00 | OK | |
r-oldrel-macos-arm64 | 1.2.0 | 46.00 | OK | |||
r-oldrel-macos-x86_64 | 1.2.0 | 114.00 | OK | |||
r-oldrel-windows-x86_64 | 1.2.0 | 8.00 | 106.00 | 114.00 | OK |
Version: 1.2.0
Check: examples
Result: ERROR
Running examples in ‘isoWater-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: wiDB_data
> ### Title: Obtain data from wiDB using a query
> ### Aliases: wiDB_data
>
> ### ** Examples
>
> #Download data for US precipitation in the 1990s
> vals = wiDB_data(minDate = "1990-01-01", maxDate = "2000-01-01",
+ countries = "US", types = "Precipitation")
Warning in unzip(paste0(tmpdir, "/", fn), exdir = paste0(tmpdir, "/downloads")) :
skipped "../" path component(s) in '../downloads/1749738421-data.csv'
Warning in unzip(paste0(tmpdir, "/", fn), exdir = paste0(tmpdir, "/downloads")) :
skipped "../" path component(s) in '../downloads/1749738421-project.csv'
Warning in unzip(paste0(tmpdir, "/", fn), exdir = paste0(tmpdir, "/downloads")) :
skipped "../" path component(s) in '../downloads/HeaderDescriptions.xlsx'
Error in if (file.size(df) == 0) { :
missing value where TRUE/FALSE needed
Calls: wiDB_data
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.2.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [2s/5s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(curl)
Using libcurl 8.14.1 with OpenSSL/3.5.0
> library(isoWater)
>
> test_check("isoWater")
Compiling model graph
Resolving undeclared variables
Allocating nodes
Graph information:
Observed stochastic nodes: 1
Unobserved stochastic nodes: 6
Total graph size: 72
Initializing model
Compiling model graph
Resolving undeclared variables
Allocating nodes
Graph information:
Observed stochastic nodes: 1
Unobserved stochastic nodes: 6
Total graph size: 72
Initializing model
Compiling model graph
Resolving undeclared variables
Allocating nodes
Graph information:
Observed stochastic nodes: 1
Unobserved stochastic nodes: 6
Total graph size: 72
Initializing model
Compiling model graph
Resolving undeclared variables
Allocating nodes
Graph information:
Observed stochastic nodes: 1
Unobserved stochastic nodes: 6
Total graph size: 72
Initializing model
Compiling model graph
Resolving undeclared variables
Allocating nodes
Graph information:
Observed stochastic nodes: 1
Unobserved stochastic nodes: 6
Total graph size: 72
Initializing model
Compiling model graph
Resolving undeclared variables
Allocating nodes
Graph information:
Observed stochastic nodes: 1
Unobserved stochastic nodes: 4
Total graph size: 46
Initializing model
Compiling model graph
Resolving undeclared variables
Allocating nodes
Graph information:
Observed stochastic nodes: 1
Unobserved stochastic nodes: 4
Total graph size: 46
Initializing model
Compiling model graph
Resolving undeclared variables
Allocating nodes
Graph information:
Observed stochastic nodes: 1
Unobserved stochastic nodes: 4
Total graph size: 46
Initializing model
Compiling model graph
Resolving undeclared variables
Allocating nodes
Graph information:
Observed stochastic nodes: 1
Unobserved stochastic nodes: 4
Total graph size: 46
Initializing model
Compiling model graph
Resolving undeclared variables
Allocating nodes
Graph information:
Observed stochastic nodes: 1
Unobserved stochastic nodes: 4
Total graph size: 46
Initializing model
[ FAIL 1 | WARN 3 | SKIP 0 | PASS 21 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-wiDB.R:20:3'): (code run outside of `test_that()`) ─────────────
Error in `if (file.size(df) == 0) {
file.remove(c(paste0(tmpdir, "/", fn), df, pf))
warning("No records returned")
return(NULL)
}`: missing value where TRUE/FALSE needed
Backtrace:
▆
1. └─isoWater::wiDB_data(...) at test-wiDB.R:20:3
[ FAIL 1 | WARN 3 | SKIP 0 | PASS 21 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.2.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘isoWater.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/isoWater.Rcheck/vign_test/isoWater/vignettes/isoWater_files/figure-html/sites-1.png
480x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 90574 bytes
Input file size = 90784 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 77082
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 77082
Output IDAT size = 77082 bytes (13492 bytes decrease)
Output file size = 77160 bytes (13624 bytes = 15.01% decrease)
Quitting from isoWater.Rmd:52-55 [query2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `if (file.size(df) == 0) ...`:
! missing value where TRUE/FALSE needed
---
Backtrace:
▆
1. └─isoWater::wiDB_data(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'isoWater.Rmd' failed with diagnostics:
missing value where TRUE/FALSE needed
--- failed re-building ‘isoWater.Rmd’
SUMMARY: processing the following file failed:
‘isoWater.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
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