Last updated on 2024-11-21 19:53:10 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| Certara.NLME8 | 13 | ||
| Certara.R | 2 | 11 | |
| Certara.RsNLME | 8 | ||
| Certara.VPCResults | 13 | ||
| tidyvpc | 2 | 11 | |
| vachette | 13 |
Current CRAN status: OK: 13
Current CRAN status: NOTE: 2, OK: 11
Version: 1.1.0
Check: dependencies in R code
Result: NOTE
Namespaces in Imports field not imported from:
‘DT’ ‘batchtools’ ‘data.table’ ‘dplyr’ ‘ggplot2’ ‘htmltools’
‘jsonlite’ ‘magrittr’ ‘methods’ ‘plotly’ ‘reshape’ ‘rlang’ ‘shiny’
‘shinyWidgets’ ‘shinyjqui’ ‘shinyjs’ ‘shinymaterial’ ‘sortable’ ‘ssh’
‘xml2’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Current CRAN status: OK: 8
Current CRAN status: OK: 13
Current CRAN status: ERROR: 2, OK: 11
Version: 1.5.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘tidyvpc_cat.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/tidyvpc.Rcheck/vign_test/tidyvpc/vignettes/tidyvpc_cat_files/figure-html/binning_1-1.png
720x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 47194 bytes
Input file size = 47332 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39183
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39183
Output IDAT size = 39183 bytes (8011 bytes decrease)
Output file size = 39261 bytes (8071 bytes = 17.05% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/tidyvpc.Rcheck/vign_test/tidyvpc/vignettes/tidyvpc_cat_files/figure-html/binning_2-1.png
720x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 74293 bytes
Input file size = 74479 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 58386
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 58386
Output IDAT size = 58386 bytes (15907 bytes decrease)
Output file size = 58464 bytes (16015 bytes = 21.50% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/tidyvpc.Rcheck/vign_test/tidyvpc/vignettes/tidyvpc_cat_files/figure-html/unnamed-chunk-4-1.png
720x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 48264 bytes
Input file size = 48402 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 41026
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 41026
Output IDAT size = 41026 bytes (7238 bytes decrease)
Output file size = 41104 bytes (7298 bytes = 15.08% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/tidyvpc.Rcheck/vign_test/tidyvpc/vignettes/tidyvpc_cat_files/figure-html/unnamed-chunk-5-1.png
720x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 77334 bytes
Input file size = 77520 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61681
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 61681
Output IDAT size = 61681 bytes (15653 bytes decrease)
Output file size = 61759 bytes (15761 bytes = 20.33% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/tidyvpc.Rcheck/vign_test/tidyvpc/vignettes/tidyvpc_cat_files/figure-html/unnamed-chunk-8-1.png
720x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 45477 bytes
Input file size = 45615 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39188
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39188
Output IDAT size = 39188 bytes (6289 bytes decrease)
Output file size = 39266 bytes (6349 bytes = 13.92% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/tidyvpc.Rcheck/vign_test/tidyvpc/vignettes/tidyvpc_cat_files/figure-html/unnamed-chunk-11-1.png
720x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 81424 bytes
Input file size = 81610 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 64842
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 64842
Output IDAT size = 64842 bytes (16582 bytes decrease)
Output file size = 64920 bytes (16690 bytes = 20.45% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/tidyvpc.Rcheck/vign_test/tidyvpc/vignettes/tidyvpc_cat_files/figure-html/unnamed-chunk-16-1.png
720x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 116982 bytes
Input file size = 117228 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 92851
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 92851
Output IDAT size = 92851 bytes (24131 bytes decrease)
Output file size = 92929 bytes (24299 bytes = 20.73% decrease)
--- finished re-building ‘tidyvpc_cat.Rmd’
--- re-building ‘tidyvpc_cont.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/tidyvpc.Rcheck/vign_test/tidyvpc/vignettes/tidyvpc_cont_files/figure-html/unnamed-chunk-15-1.png
864x576 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 111988 bytes
Input file size = 112222 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 90394
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 90394
Output IDAT size = 90394 bytes (21594 bytes decrease)
Output file size = 90472 bytes (21750 bytes = 19.38% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/tidyvpc.Rcheck/vign_test/tidyvpc/vignettes/tidyvpc_cont_files/figure-html/unnamed-chunk-16-1.png
864x576 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 129401 bytes
Input file size = 129659 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104512
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 104512
Output IDAT size = 104512 bytes (24889 bytes decrease)
Output file size = 104590 bytes (25069 bytes = 19.33% decrease)
Quitting from lines 213-221 [unnamed-chunk-17] (tidyvpc_cont.Rmd)
Error: processing vignette 'tidyvpc_cont.Rmd' failed with diagnostics:
NA/NaN/Inf in foreign function call (arg 2)
--- failed re-building ‘tidyvpc_cont.Rmd’
--- re-building ‘tidyvpc_nlmixr2.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-clang/tidyvpc.Rcheck/vign_test/tidyvpc/vignettes/tidyvpc_nlmixr2_files/figure-html/vpc-std-plot-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 44083 bytes
Input file size = 44221 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34835
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34835
Output IDAT size = 34835 bytes (9248 bytes decrease)
Output file size = 34913 bytes (9308 bytes = 21.05% decrease)
** Processing: /data/gannet/ripley/R/packages/tests-clang/tidyvpc.Rcheck/vign_test/tidyvpc/vignettes/tidyvpc_nlmixr2_files/figure-html/vpc-predcorr-plot-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 42515 bytes
Input file size = 42653 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 33847
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 33847
Output IDAT size = 33847 bytes (8668 bytes decrease)
Output file size = 33925 bytes (8728 bytes = 20.46% decrease)
--- finished re-building ‘tidyvpc_nlmixr2.Rmd’
SUMMARY: processing the following file failed:
‘tidyvpc_cont.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.5.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'tidyvpc_cat.Rmd' using rmarkdown
--- finished re-building 'tidyvpc_cat.Rmd'
--- re-building 'tidyvpc_cont.Rmd' using rmarkdown
--- finished re-building 'tidyvpc_cont.Rmd'
--- re-building 'tidyvpc_nlmixr2.Rmd' using rmarkdown
Quitting from lines 45-71 [model-estimate] (tidyvpc_nlmixr2.Rmd)
Error: processing vignette 'tidyvpc_nlmixr2.Rmd' failed with diagnostics:
<text>:1:1: unexpected '<'
1: <
^
--- failed re-building 'tidyvpc_nlmixr2.Rmd'
SUMMARY: processing the following file failed:
'tidyvpc_nlmixr2.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-windows-x86_64
Current CRAN status: OK: 13
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.