CRAN Package Check Results for Maintainer ‘Javier Palarea-Albaladejo <javier.palarea at udg.edu>’

Last updated on 2025-03-20 22:52:57 CET.

Package	WARN	NOTE	OK
MALDIrppa	1	3	11
zCompositions			15

Package MALDIrppa

Current CRAN status: WARN: 1, NOTE: 3, OK: 11

Additional issues

donttest

Version: 1.1.0-2
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: MALDIrppa-package.Rd: MALDIquant addMetadata.Rd: AbstractMassObject-class alignPeaks.Rd: MassPeaks, MALDIquant, referencePeaks, binPeaks, warpMassPeaks countPeaks.Rd: MassPeaks detectOutliers.Rd: MassSpectrum, covMcd importSpectra.Rd: MassSpectrum peakPatterns.Rd: intensityMatrix, MassPeaks rawToPeaks.Rd: MassPeaks rawToSpectra.Rd: MassSpectrum redResolution.Rd: MassSpectrum-class screenSpectra.Rd: MassSpectrum, Qn snrPeaks.Rd: MassPeaks, detectPeaks spectra.Rd: MassSpectrum summaryPeaks.Rd: MassPeaks summarySpectra.Rd: MassSpectrum transfIntensity.Rd: MassSpectrum-class, transformIntensity wavSmoothing.Rd: MassSpectrum writeIntensity.Rd: intensityMatrix Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64

Version: 1.1.0-2
Check: whether package can be installed
Result: WARN Found the following significant warnings: Rd warning: MALDIrppa-package.Rd:9: missing link ‘MALDIquant’ Rd warning: addMetadata.Rd:8: missing link ‘AbstractMassObject-class’ Rd warning: addMetadata.Rd:16: missing link ‘AbstractMassObject-class’ Rd warning: addMetadata.Rd:27: missing link ‘AbstractMassObject-class’ Rd warning: alignPeaks.Rd:8: missing link ‘MassPeaks’ Rd warning: alignPeaks.Rd:8: missing link ‘MALDIquant’ Rd warning: alignPeaks.Rd:16: missing link ‘MassPeaks’ Rd warning: alignPeaks.Rd:19: missing link ‘referencePeaks’ Rd warning: alignPeaks.Rd:22: missing link ‘referencePeaks’ Rd warning: alignPeaks.Rd:22: missing link ‘binPeaks’ Rd warning: alignPeaks.Rd:24: missing link ‘MALDIquant’ Rd warning: alignPeaks.Rd:28: missing link ‘warpMassPeaks’ Rd warning: alignPeaks.Rd:28: missing link ‘binPeaks’ Rd warning: alignPeaks.Rd:28: missing link ‘MALDIquant’ Rd warning: alignPeaks.Rd:31: missing link ‘MassPeaks’ Rd warning: countPeaks.Rd:8: missing link ‘MassPeaks’ Rd warning: countPeaks.Rd:16: missing link ‘MassPeaks’ Rd warning: detectOutliers.Rd:14: missing link ‘MassSpectrum’ Rd warning: detectOutliers.Rd:20: missing link ‘covMcd’ Rd warning: importSpectra.Rd:7: missing link ‘MassSpectrum’ Rd warning: importSpectra.Rd:19: missing link ‘MassSpectrum’ Rd warning: importSpectra.Rd:22: missing link ‘MassSpectrum’ Rd warning: peakPatterns.Rd:8: missing link ‘intensityMatrix’ Rd warning: peakPatterns.Rd:20: missing link ‘MassPeaks’ Rd warning: peakPatterns.Rd:61: missing link ‘intensityMatrix’ Rd warning: rawToPeaks.Rd:5: missing link ‘MassPeaks’ Rd warning: rawToPeaks.Rd:8: missing link ‘MassPeaks’ Rd warning: rawToPeaks.Rd:23: missing link ‘MassPeaks’ Rd warning: rawToPeaks.Rd:26: missing link ‘MassPeaks’ Rd warning: rawToSpectra.Rd:5: missing link ‘MassSpectrum’ Rd warning: rawToSpectra.Rd:8: missing link ‘MassSpectrum’ Rd warning: rawToSpectra.Rd:23: missing link ‘MassSpectrum’ Rd warning: rawToSpectra.Rd:26: missing link ‘MassSpectrum’ Rd warning: redResolution.Rd:8: missing link ‘MassSpectrum-class’ Rd warning: redResolution.Rd:15: missing link ‘MassSpectrum-class’ Rd warning: redResolution.Rd:26: missing link ‘MassSpectrum-class’ Rd warning: screenSpectra.Rd:18: missing link ‘MassSpectrum’ Rd warning: screenSpectra.Rd:27: missing link ‘Qn’ Rd warning: screenSpectra.Rd:42: missing link ‘Qn’ Rd warning: snrPeaks.Rd:16: missing link ‘MassPeaks’ Rd warning: snrPeaks.Rd:20: missing link ‘MassPeaks’ Rd warning: snrPeaks.Rd:20: missing link ‘detectPeaks’ Rd warning: spectra.Rd:8: missing link ‘MassSpectrum’ Rd warning: summaryPeaks.Rd:8: missing link ‘MassPeaks’ Rd warning: summaryPeaks.Rd:16: missing link ‘MassPeaks’ Rd warning: summaryPeaks.Rd:22: missing link ‘MassPeaks’ Rd warning: summaryPeaks.Rd:25: missing link ‘MassPeaks’ Rd warning: summarySpectra.Rd:8: missing link ‘MassSpectrum’ Rd warning: summarySpectra.Rd:16: missing link ‘MassSpectrum’ Rd warning: summarySpectra.Rd:22: missing link ‘MassSpectrum’ Rd warning: summarySpectra.Rd:25: missing link ‘MassSpectrum’ Rd warning: transfIntensity.Rd:8: missing link ‘MassSpectrum-class’ Rd warning: transfIntensity.Rd:15: missing link ‘MassSpectrum-class’ Rd warning: transfIntensity.Rd:25: missing link ‘transformIntensity’ Rd warning: transfIntensity.Rd:28: missing link ‘MassSpectrum-class’ Rd warning: wavSmoothing.Rd:8: missing link ‘MassSpectrum’ Rd warning: wavSmoothing.Rd:17: missing link ‘MassSpectrum’ Rd warning: wavSmoothing.Rd:36: missing link ‘MassSpectrum’ Rd warning: writeIntensity.Rd:8: missing link ‘intensityMatrix’ Rd warning: writeIntensity.Rd:17: missing link ‘intensityMatrix’ Flavor: r-patched-linux-x86_64

Package zCompositions

Current CRAN status: OK: 15