CRAN Package Check Results for Maintainer ‘Matthew Kay <mjskay at northwestern.edu>’

Last updated on 2025-03-11 14:55:56 CET.

Package	ERROR	NOTE	OK
ARTool	2	3	10
ggblend		3	12
ggdist		3	12
tidybayes			15

Package ARTool

Current CRAN status: ERROR: 2, NOTE: 3, OK: 10

Version: 0.11.1
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: anova.art.Rd: Anova art.Rd: lmer art.con.Rd: contrast, summary.emmGrid, lmer, emmeans artlm.Rd: lmer, merMod artlm.con.Rd: lmer, merMod Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Version: 0.11.1
Check: tests
Result: ERROR Running ‘testthat.R’ [37s/113s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(ARTool) > > test_check("ARTool") [ FAIL 8 | WARN 56 | SKIP 0 | PASS 145 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test.anova.art.R:50:5'): anova.art of Higgins1990Table5 matches results of the original ARTool ── `a` not equal to ref[-2]. Component "F": Mean relative difference: 0.7174749 Component "Pr(>F)": Mean relative difference: 0.9944212 ── Failure ('test.art.R:66:5'): art allows models with missing data in the grouping terms ── anova(m)$F not equal to 0.6862745. 1/1 mismatches [1] 0.166 - 0.686 == -0.52 ── Failure ('test.art.con.R:75:5'): art.con returns same result as ARTool.exe + JMP: with grouping term, two-factor model ── summary(art.con(m, "Moisture"))$t not equal to c(...). 6/6 mismatches (average diff: 3.01) [1] -1.783 - -5.61 == 3.82 [2] -2.607 - -8.20 == 5.59 [3] -1.172 - -3.68 == 2.51 [4] -0.824 - -2.59 == 1.77 [5] 0.612 - 1.92 == -1.31 [6] 1.436 - 4.51 == -3.08 ── Failure ('test.art.con.R:83:5'): art.con returns same result as ARTool.exe + JMP: with grouping term, two-factor model ── ...[[]] not equal to c(-1.107980814, -3.036288461, -5.007904345). 3/3 mismatches (average diff: 0.0131) [1] -1.11 - -1.11 == -0.0033 [2] -3.02 - -3.04 == 0.0136 [3] -4.99 - -5.01 == 0.0225 ── Failure ('test.art.con.R:96:5'): art.con returns same result as ARTool.exe + JMP: with grouping term, three-factor model ── summary(art.con(m, "A"))$t not equal to c(-16.98). 1/1 mismatches [1] -13.5 - -17 == 3.5 ── Failure ('test.art.con.R:104:5'): art.con returns same result as ARTool.exe + JMP: with grouping term, three-factor model ── ...[[]] not equal to c(-0.072115146, -14.74754746, -10.13217808). 3/3 mismatches (average diff: 1.88) [1] -0.0558 - -0.0721 == 0.0163 [2] -11.4202 - -14.7475 == 3.3274 [3] -7.8461 - -10.1322 == 2.2860 ── Failure ('test.art.con.R:112:5'): art.con returns same result as ARTool.exe + JMP: with grouping term, three-factor model ── ...[[]] not equal to c(-8.041788515, -8.041788515, -7.835588809). 3/3 mismatches (average diff: 2.98) [1] -5.04 - -8.04 == 3.00 [2] -5.04 - -8.04 == 3.00 [3] -4.91 - -7.84 == 2.92 ── Failure ('test.artlm.R:32:5'): artlm returns models whose data can be recovered by emmeans ── summary(pairs(emmeans::emmeans(artlm(m, "Moisture"), "Moisture")))$t not equal to c(-5.60684, -8.19773, -3.68392, -2.59089, 1.92292, 4.51381). 6/6 mismatches (average diff: 3.01) [1] -1.783 - -5.61 == 3.82 [2] -2.607 - -8.20 == 5.59 [3] -1.172 - -3.68 == 2.51 [4] -0.824 - -2.59 == 1.77 [5] 0.612 - 1.92 == -1.31 [6] 1.436 - 4.51 == -3.08 [ FAIL 8 | WARN 56 | SKIP 0 | PASS 145 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.11.1
Check: tests
Result: ERROR Running ‘testthat.R’ [32s/36s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(ARTool) > > test_check("ARTool") [ FAIL 8 | WARN 56 | SKIP 0 | PASS 145 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test.anova.art.R:50:5'): anova.art of Higgins1990Table5 matches results of the original ARTool ── `a` not equal to ref[-2]. Component "F": Mean relative difference: 0.7174749 Component "Pr(>F)": Mean relative difference: 0.9944212 ── Failure ('test.art.R:66:5'): art allows models with missing data in the grouping terms ── anova(m)$F not equal to 0.6862745. 1/1 mismatches [1] 0.166 - 0.686 == -0.52 ── Failure ('test.art.con.R:75:5'): art.con returns same result as ARTool.exe + JMP: with grouping term, two-factor model ── summary(art.con(m, "Moisture"))$t not equal to c(...). 6/6 mismatches (average diff: 3.01) [1] -1.783 - -5.61 == 3.82 [2] -2.607 - -8.20 == 5.59 [3] -1.172 - -3.68 == 2.51 [4] -0.824 - -2.59 == 1.77 [5] 0.612 - 1.92 == -1.31 [6] 1.436 - 4.51 == -3.08 ── Failure ('test.art.con.R:83:5'): art.con returns same result as ARTool.exe + JMP: with grouping term, two-factor model ── ...[[]] not equal to c(-1.107980814, -3.036288461, -5.007904345). 3/3 mismatches (average diff: 0.0131) [1] -1.11 - -1.11 == -0.0033 [2] -3.02 - -3.04 == 0.0136 [3] -4.99 - -5.01 == 0.0225 ── Failure ('test.art.con.R:96:5'): art.con returns same result as ARTool.exe + JMP: with grouping term, three-factor model ── summary(art.con(m, "A"))$t not equal to c(-16.98). 1/1 mismatches [1] -13.5 - -17 == 3.5 ── Failure ('test.art.con.R:104:5'): art.con returns same result as ARTool.exe + JMP: with grouping term, three-factor model ── ...[[]] not equal to c(-0.072115146, -14.74754746, -10.13217808). 3/3 mismatches (average diff: 1.88) [1] -0.0558 - -0.0721 == 0.0163 [2] -11.4202 - -14.7475 == 3.3274 [3] -7.8461 - -10.1322 == 2.2860 ── Failure ('test.art.con.R:112:5'): art.con returns same result as ARTool.exe + JMP: with grouping term, three-factor model ── ...[[]] not equal to c(-8.041788515, -8.041788515, -7.835588809). 3/3 mismatches (average diff: 2.98) [1] -5.04 - -8.04 == 3.00 [2] -5.04 - -8.04 == 3.00 [3] -4.91 - -7.84 == 2.92 ── Failure ('test.artlm.R:32:5'): artlm returns models whose data can be recovered by emmeans ── summary(pairs(emmeans::emmeans(artlm(m, "Moisture"), "Moisture")))$t not equal to c(-5.60684, -8.19773, -3.68392, -2.59089, 1.92292, 4.51381). 6/6 mismatches (average diff: 3.01) [1] -1.783 - -5.61 == 3.82 [2] -2.607 - -8.20 == 5.59 [3] -1.172 - -3.68 == 2.51 [4] -0.824 - -2.59 == 1.77 [5] 0.612 - 1.92 == -1.31 [6] 1.436 - 4.51 == -3.08 [ FAIL 8 | WARN 56 | SKIP 0 | PASS 145 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Package ggblend

Current CRAN status: NOTE: 3, OK: 12

Version: 0.1.0
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: ggblend-package.Rd: ggplot layer_list.Rd: ggplot2 partition.Rd: vars Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Package ggdist

Current CRAN status: NOTE: 3, OK: 12

Version: 3.3.2
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: Pr_.Rd: after_stat, quasiquotation cut_cdf_qi.Rd: cdf geom_blur_dots.Rd: position_dodge, layer, geom_dotplot, geom_point, ggplot geom_dots.Rd: position_dodge, layer, geom_dotplot, geom_point, ggplot geom_dotsinterval.Rd: position_dodge, layer, scale_size_continuous, geom_dotplot, geom_point, dist_normal, dist_beta, aes, ggplot geom_interval.Rd: position_dodge, layer, scale_size_continuous, ggplot2, ggplot geom_lineribbon.Rd: geom_line, geom_ribbon, layer, ggplot geom_pointinterval.Rd: position_dodge, layer, scale_size_continuous, ggplot2, ggplot geom_slab.Rd: position_dodge, layer, ggplot geom_slabinterval.Rd: position_dodge, layer, scale_size_continuous, ggplot geom_spike.Rd: position_dodge, layer, ggplot geom_swarm.Rd: position_dodge, layer, geom_dotplot, geom_point, ggplot geom_weave.Rd: position_dodge, layer, geom_dotplot, geom_point, ggplot ggdist-ggproto.Rd: ggproto guide_rampbar.Rd: guide_colourbar parse_dist.Rd: dist_truncated point_interval.Rd: stat_summary scale_colour_ramp.Rd: discrete_scale, continuous_scale, guides, ggplot scale_side_mirrored.Rd: ggplot scale_thickness.Rd: ggplot smooth_discrete.Rd: resolution stat_ccdfinterval.Rd: position_dodge, layer, scale_size_continuous, dist_normal, dist_beta, aes, ggplot, after_stat, stage stat_cdfinterval.Rd: position_dodge, layer, scale_size_continuous, dist_normal, dist_beta, aes, ggplot, after_stat, stage stat_dots.Rd: position_dodge, layer, geom_dotplot, geom_point, dist_normal, dist_beta, aes, ggplot, after_stat, stage stat_dotsinterval.Rd: position_dodge, layer, scale_size_continuous, geom_dotplot, geom_point, dist_normal, dist_beta, aes, ggplot, after_stat, stage stat_eye.Rd: position_dodge, layer, scale_size_continuous, dist_normal, dist_beta, aes, ggplot, after_stat, stage stat_gradientinterval.Rd: position_dodge, layer, scale_size_continuous, dist_normal, dist_beta, aes, ggplot, after_stat, stage stat_halfeye.Rd: position_dodge, layer, scale_size_continuous, dist_normal, dist_beta, aes, ggplot, after_stat, stage stat_histinterval.Rd: position_dodge, layer, scale_size_continuous, dist_normal, dist_beta, aes, ggplot, after_stat, stage stat_interval.Rd: position_dodge, layer, scale_size_continuous, dist_normal, dist_beta, aes, ggplot, after_stat, stage stat_lineribbon.Rd: position_dodge, layer, dist_normal, dist_beta, aes, ggplot, after_stat, stage stat_mcse_dots.Rd: position_dodge, layer, geom_dotplot, geom_point, dist_normal, dist_beta, aes, ggplot, after_stat, stage stat_pointinterval.Rd: position_dodge, layer, scale_size_continuous, dist_normal, dist_beta, aes, ggplot, after_stat, stage stat_ribbon.Rd: position_dodge, layer, dist_normal, dist_beta, aes, ggplot, after_stat, stage stat_slab.Rd: position_dodge, layer, dist_normal, dist_beta, aes, ggplot, after_stat, stage stat_slabinterval.Rd: position_dodge, layer, scale_size_continuous, dist_normal, dist_beta, aes, ggplot, after_stat, stage stat_spike.Rd: position_dodge, layer, after_stat, dist_normal, dist_beta, aes, ggplot, stage sub-geometry-scales.Rd: scale_color_discrete, scale_alpha_continuous, scale_color_continuous, ggplot subguide_axis.Rd: guide_axis Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Package tidybayes

Current CRAN status: OK: 15