Last updated on 2025-11-13 03:51:14 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.5 | 13.39 | 125.03 | 138.42 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.5 | 10.47 | 88.58 | 99.05 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.5 | 31.00 | 180.85 | 211.85 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.5 | 58.00 | 170.66 | 228.66 | OK | |
| r-devel-windows-x86_64 | 1.1.5 | 15.00 | 134.00 | 149.00 | OK | |
| r-patched-linux-x86_64 | 1.1.5 | 15.25 | 118.69 | 133.94 | OK | |
| r-release-linux-x86_64 | 1.1.5 | 12.94 | 117.14 | 130.08 | OK | |
| r-release-macos-arm64 | 1.1.5 | 7.00 | 99.00 | 106.00 | OK | |
| r-release-macos-x86_64 | 1.1.5 | 12.00 | 165.00 | 177.00 | OK | |
| r-release-windows-x86_64 | 1.1.5 | 15.00 | 117.00 | 132.00 | ERROR | |
| r-oldrel-macos-arm64 | 1.1.5 | 6.00 | 112.00 | 118.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.5 | 12.00 | 118.00 | 130.00 | OK | |
| r-oldrel-windows-x86_64 | 1.1.5 | 20.00 | 172.00 | 192.00 | OK |
Version: 1.1.5
Check: examples
Result: ERROR
Running examples in 'refseqR-Ex.R' failed
The error most likely occurred in:
> ### Name: refseq_CDScoords
> ### Title: Extract the coding sequences (CDS) coordinates from a transcript
> ### accession
> ### Aliases: refseq_CDScoords
>
> ### ** Examples
>
> transcript = c("XM_004487701")
> refseq_CDScoords(transcript)
Error in refseq_CDScoords(transcript) :
Exactly one CDS per file is expected. Contact the maintainer
Execution halted
Flavor: r-release-windows-x86_64
Version: 1.1.5
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'refseqR.Rmd' using rmarkdown
Quitting from refseqR.Rmd:109-111 [unnamed-chunk-10]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `refseq_CDScoords()`:
! Exactly one CDS per file is expected. Contact the maintainer
---
Backtrace:
▆
1. ├─base::substr(toString(refseq_CDSseq(transcript)), 1, 60)
2. ├─base::toString(refseq_CDSseq(transcript))
3. └─refseqR::refseq_CDSseq(transcript)
4. └─refseqR::refseq_CDScoords(transcript)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'refseqR.Rmd' failed with diagnostics:
Exactly one CDS per file is expected. Contact the maintainer
--- failed re-building 'refseqR.Rmd'
SUMMARY: processing the following file failed:
'refseqR.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-windows-x86_64
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They may not be fully stable and should be used with caution. We make no claims about them.