CRAN Package Check Results for Package refseqR

Last updated on 2024-10-06 11:49:33 CEST.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	1.1.4	16.21	122.48	138.69	OK
r-devel-linux-x86_64-debian-gcc	1.1.4	10.04	86.87	96.91	ERROR
r-devel-linux-x86_64-fedora-clang	1.1.4			227.52	OK
r-devel-linux-x86_64-fedora-gcc	1.1.4			236.71	OK
r-devel-windows-x86_64	1.1.4	14.00	159.00	173.00	OK
r-patched-linux-x86_64	1.1.4	12.86	113.53	126.39	ERROR
r-release-linux-x86_64	1.1.4	13.85	114.36	128.21	OK
r-release-macos-arm64	1.1.4			131.00	OK
r-release-macos-x86_64	1.1.4			252.00	OK
r-release-windows-x86_64	1.1.4	15.00	167.00	182.00	OK
r-oldrel-macos-arm64	1.1.4			153.00	OK
r-oldrel-macos-x86_64	1.1.4			237.00	OK
r-oldrel-windows-x86_64	1.1.4	18.00	197.00	215.00	OK

Check Details

Version: 1.1.4
Check: examples
Result: ERROR Running examples in ‘refseqR-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: refseq_GeneID > ### Title: Get the GeneID > ### Aliases: refseq_GeneID > > ### ** Examples > > # Get the gene symbol from a set of transcript accessions > transcript = c("XM_004487701", "XM_004488493") > sapply(transcript, function(x) refseq_GeneID (x, db = "nuccore", retries = 4), USE.NAMES = FALSE) Error: HTTP failure: 500 Execution halted Flavors: r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64

Version: 1.1.4
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘refseqR.Rmd’ using rmarkdown Quitting from lines 90-92 [unnamed-chunk-7] (refseqR.Rmd) Error: processing vignette 'refseqR.Rmd' failed with diagnostics: HTTP failure: 500 --- failed re-building ‘refseqR.Rmd’ SUMMARY: processing the following file failed: ‘refseqR.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.1.4
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘refseqR.Rmd’ using rmarkdown Quitting from lines 140-142 [unnamed-chunk-15] (refseqR.Rmd) Error: processing vignette 'refseqR.Rmd' failed with diagnostics: HTTP failure: 500 --- failed re-building ‘refseqR.Rmd’ SUMMARY: processing the following file failed: ‘refseqR.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-patched-linux-x86_64