Last updated on 2026-02-26 13:52:12 CET.
| Package | ERROR | OK |
|---|---|---|
| mapi | 2 | 12 |
Current CRAN status: ERROR: 2, OK: 12
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [120s/569s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.846, system: 0.117, elapsed: 4.289 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.335, system: 0.411, elapsed: 22.836 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.229, system: 0.030, elapsed: 0.508 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.696, system: 1.578, elapsed: 88.131 seconds]
Computing values for grid cells...
... done. [user: 0.192, system: 0.010, elapsed: 0.376 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.054, system: 2.650, elapsed: 119.095 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.676, system: 0.060, elapsed: 3.313 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.005, system: 0.200, elapsed: 21.051 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.232, system: 0.030, elapsed: 1.251 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.169, system: 1.706, elapsed: 51.934 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.007, elapsed: 0.187 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.022, system: 2.346, elapsed: 79.969 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.639, system: 0.073, elapsed: 4.767 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.979, system: 0.240, elapsed: 27.784 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.320, system: 0.033, elapsed: 1.117 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.244, system: 2.958, elapsed: 140.773 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.013, elapsed: 0.229 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
2 1 3 4
... computing probabilities from permuted values ...
... done. [user: 1.458, system: 0.474, elapsed: 3.761 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.626, system: 4.175, elapsed: 181.042 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.848, system: 0.187, elapsed: 6.121 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.971, system: 0.349, elapsed: 29.459 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.224, system: 0.041, elapsed: 1.223 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.915, system: 1.998, elapsed: 75.779 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.012, elapsed: 0.309 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.937, system: 1.565, elapsed: 56.143 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 33.996, system: 4.801, elapsed: 172.724 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/10m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.858, system: 0.121, elapsed: 3.117 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.182, system: 0.326, elapsed: 17.114 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.257, system: 0.039, elapsed: 0.445 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.122, system: 1.365, elapsed: 21.018 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.012, elapsed: 0.587 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.372, system: 2.330, elapsed: 44.673 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.855, system: 0.094, elapsed: 2.826 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.993, system: 0.356, elapsed: 23.076 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.224, system: 0.031, elapsed: 0.906 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.016, system: 2.391, elapsed: 143.801 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.011, elapsed: 0.481 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.993, system: 3.353, elapsed: 173.399 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.804, system: 0.124, elapsed: 6.048 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.153, system: 0.412, elapsed: 29.887 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.235, system: 0.040, elapsed: 2.482 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.145, system: 1.754, elapsed: 47.429 seconds]
Computing values for grid cells...
... done. [user: 0.191, system: 0.018, elapsed: 0.248 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.519, system: 0.538, elapsed: 5.013 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 22.867, system: 3.394, elapsed: 94.205 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.737, system: 0.061, elapsed: 5.373 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.091, system: 0.364, elapsed: 35.287 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.227, system: 0.042, elapsed: 1.367 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.005, system: 3.261, elapsed: 185.654 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.012, elapsed: 0.623 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.424, system: 1.694, elapsed: 54.233 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 33.499, system: 5.916, elapsed: 286.805 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.