Last updated on 2026-02-06 09:49:41 CET.
| Package | ERROR | OK |
|---|---|---|
| mapi | 2 | 11 |
Current CRAN status: ERROR: 2, OK: 11
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [102s/456s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.595, system: 0.040, elapsed: 4.499 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.607, system: 0.119, elapsed: 16.996 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.223, system: 0.017, elapsed: 0.349 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.715, system: 0.766, elapsed: 14.619 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.007, elapsed: 0.193 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.915, system: 0.973, elapsed: 37.818 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.578, system: 0.046, elapsed: 1.821 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.625, system: 0.139, elapsed: 10.549 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.227, system: 0.018, elapsed: 0.298 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.879, system: 0.709, elapsed: 39.810 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.005, elapsed: 0.239 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.111, system: 0.952, elapsed: 53.348 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.789, system: 0.092, elapsed: 3.013 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.026, system: 0.326, elapsed: 13.000 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.311, system: 0.018, elapsed: 0.389 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.950, system: 0.846, elapsed: 70.755 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.004, elapsed: 0.541 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.285, system: 0.356, elapsed: 2.731 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.218, system: 1.695, elapsed: 91.922 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.586, system: 0.043, elapsed: 4.956 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.619, system: 0.061, elapsed: 26.202 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.017, elapsed: 1.274 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.179, system: 0.916, elapsed: 180.649 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.003, elapsed: 0.375 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.336, system: 0.636, elapsed: 45.421 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.851, system: 1.708, elapsed: 260.639 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [102s/592s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.718, system: 0.060, elapsed: 4.855 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.517, system: 0.175, elapsed: 13.487 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.284, system: 0.024, elapsed: 0.243 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.104, system: 0.806, elapsed: 16.075 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.009, elapsed: 0.268 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.392, system: 1.105, elapsed: 35.942 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.732, system: 0.073, elapsed: 2.269 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.801, system: 0.332, elapsed: 12.365 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.018, elapsed: 1.106 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.919, system: 0.935, elapsed: 180.852 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.004, elapsed: 0.493 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.455, system: 1.398, elapsed: 198.127 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.567, system: 0.030, elapsed: 4.552 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.539, system: 0.054, elapsed: 26.440 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.222, system: 0.017, elapsed: 1.221 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.957, system: 0.955, elapsed: 181.566 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.003, elapsed: 0.484 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.171, system: 0.283, elapsed: 1.978 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.307, system: 1.372, elapsed: 218.081 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.564, system: 0.028, elapsed: 4.502 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.437, system: 0.064, elapsed: 25.883 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.223, system: 0.016, elapsed: 1.193 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.906, system: 0.780, elapsed: 67.649 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.005, elapsed: 0.220 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.866, system: 0.831, elapsed: 25.671 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.951, system: 1.754, elapsed: 126.774 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.