Last updated on 2025-11-11 15:51:20 CET.
| Package | ERROR | OK |
|---|---|---|
| mapi | 2 | 11 |
Current CRAN status: ERROR: 2, OK: 11
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/151s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.536, system: 0.040, elapsed: 2.467 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.610, system: 0.068, elapsed: 15.965 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.014, elapsed: 0.347 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.923, system: 0.194, elapsed: 6.977 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.004, elapsed: 0.283 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.003, system: 0.342, elapsed: 26.980 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.517, system: 0.032, elapsed: 2.338 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.544, system: 0.057, elapsed: 16.905 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.012, elapsed: 0.304 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.989, system: 0.177, elapsed: 6.182 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.003, elapsed: 0.272 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.972, system: 0.300, elapsed: 26.884 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.612, system: 0.031, elapsed: 2.703 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.536, system: 0.068, elapsed: 15.893 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.012, elapsed: 0.373 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.890, system: 0.168, elapsed: 5.939 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.003, elapsed: 0.270 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.197, system: 0.246, elapsed: 1.908 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.261, system: 0.554, elapsed: 28.123 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.587, system: 0.033, elapsed: 4.801 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.611, system: 0.070, elapsed: 25.312 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.011, elapsed: 0.414 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.870, system: 0.171, elapsed: 6.409 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.006, elapsed: 0.437 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.869, system: 0.465, elapsed: 19.422 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.989, system: 0.782, elapsed: 58.295 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/157s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.574, system: 0.038, elapsed: 2.601 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.528, system: 0.062, elapsed: 16.939 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.014, elapsed: 0.334 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.713, system: 0.187, elapsed: 6.396 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.004, elapsed: 0.261 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.736, system: 0.327, elapsed: 27.449 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.667, system: 0.034, elapsed: 2.999 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.535, system: 0.082, elapsed: 18.166 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.011, elapsed: 0.371 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.836, system: 0.172, elapsed: 7.552 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.009, elapsed: 0.683 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.993, system: 0.346, elapsed: 30.781 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.691, system: 0.042, elapsed: 5.002 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.629, system: 0.089, elapsed: 24.273 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.012, elapsed: 0.304 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.821, system: 0.174, elapsed: 7.033 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.003, elapsed: 0.265 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.150, system: 0.234, elapsed: 1.225 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.332, system: 0.590, elapsed: 39.621 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.628, system: 0.037, elapsed: 2.945 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.646, system: 0.099, elapsed: 19.081 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.012, elapsed: 0.370 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.833, system: 0.185, elapsed: 6.566 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.005, elapsed: 0.268 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.782, system: 0.496, elapsed: 19.548 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.914, system: 0.865, elapsed: 50.007 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.