Last updated on 2025-09-04 05:51:34 CEST.
| Package | ERROR | OK |
|---|---|---|
| mapi | 2 | 11 |
Current CRAN status: ERROR: 2, OK: 11
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/139s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.548, system: 0.052, elapsed: 2.581 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.955, system: 0.093, elapsed: 13.877 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.015, elapsed: 0.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.770, system: 0.194, elapsed: 5.719 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.005, elapsed: 0.275 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.180, system: 0.384, elapsed: 23.529 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.443, system: 0.034, elapsed: 1.965 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.903, system: 0.083, elapsed: 13.591 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.013, elapsed: 0.270 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.712, system: 0.171, elapsed: 5.966 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.004, elapsed: 0.306 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.940, system: 0.324, elapsed: 22.918 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.557, system: 0.034, elapsed: 2.400 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.933, system: 0.095, elapsed: 14.683 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.351 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.732, system: 0.183, elapsed: 6.750 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.006, elapsed: 0.278 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.193, system: 0.223, elapsed: 1.309 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.406, system: 0.574, elapsed: 27.050 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.483, system: 0.032, elapsed: 2.720 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.960, system: 0.072, elapsed: 18.255 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.011, elapsed: 0.540 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.792, system: 0.187, elapsed: 11.166 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.429 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.291, system: 0.470, elapsed: 22.444 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.526, system: 0.809, elapsed: 57.265 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/137s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.588, system: 0.057, elapsed: 3.091 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.984, system: 0.107, elapsed: 14.998 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.014, elapsed: 0.326 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.594, system: 0.179, elapsed: 6.277 seconds]
Computing values for grid cells...
... done. [user: 0.155, system: 0.004, elapsed: 0.251 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.058, system: 0.380, elapsed: 25.909 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.501, system: 0.035, elapsed: 2.588 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.862, system: 0.066, elapsed: 13.452 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.011, elapsed: 0.270 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.610, system: 0.160, elapsed: 5.493 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.006, elapsed: 0.276 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.851, system: 0.299, elapsed: 22.945 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.558, system: 0.030, elapsed: 2.557 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.930, system: 0.079, elapsed: 14.127 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.011, elapsed: 0.329 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.562, system: 0.166, elapsed: 9.553 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.012, elapsed: 0.517 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.035, system: 0.233, elapsed: 1.750 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.079, system: 0.557, elapsed: 30.116 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.452, system: 0.028, elapsed: 3.643 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.886, system: 0.057, elapsed: 20.103 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.348 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.575, system: 0.161, elapsed: 6.960 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.295 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.016, system: 0.453, elapsed: 15.843 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.929, system: 0.740, elapsed: 48.566 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.