Last updated on 2025-12-08 19:50:55 CET.
| Package | ERROR | OK |
|---|---|---|
| mapi | 2 | 11 |
Current CRAN status: ERROR: 2, OK: 11
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/140s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.668, system: 0.069, elapsed: 2.637 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.678, system: 0.236, elapsed: 15.545 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.018, elapsed: 0.343 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.058, system: 0.297, elapsed: 6.500 seconds]
Computing values for grid cells...
... done. [user: 0.195, system: 0.018, elapsed: 0.257 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.355, system: 0.678, elapsed: 26.145 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.780, system: 0.084, elapsed: 2.568 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.636, system: 0.267, elapsed: 15.406 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.019, elapsed: 0.304 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.328, system: 0.360, elapsed: 9.607 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.012, elapsed: 0.368 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.691, system: 0.794, elapsed: 29.138 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.805, system: 0.100, elapsed: 3.275 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.526, system: 0.148, elapsed: 16.402 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.207, system: 0.012, elapsed: 0.449 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.765, system: 0.162, elapsed: 7.186 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.332 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.214, system: 0.226, elapsed: 1.499 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.333, system: 0.700, elapsed: 30.489 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.556, system: 0.036, elapsed: 3.121 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.345, system: 0.053, elapsed: 16.001 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.012, elapsed: 0.380 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.798, system: 0.168, elapsed: 6.361 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.003, elapsed: 0.325 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.577, system: 0.460, elapsed: 19.358 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.287, system: 0.754, elapsed: 46.690 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [82s/156s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.633, system: 0.038, elapsed: 3.702 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.510, system: 0.061, elapsed: 19.592 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.014, elapsed: 0.388 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.678, system: 0.180, elapsed: 7.085 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.385 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.734, system: 0.321, elapsed: 32.303 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.598, system: 0.033, elapsed: 3.653 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.507, system: 0.086, elapsed: 20.891 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.011, elapsed: 0.458 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.763, system: 0.171, elapsed: 8.048 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.005, elapsed: 0.304 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.778, system: 0.333, elapsed: 34.660 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.565, system: 0.029, elapsed: 3.172 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.462, system: 0.089, elapsed: 21.461 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.011, elapsed: 0.445 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.663, system: 0.167, elapsed: 7.243 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.267 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.114, system: 0.220, elapsed: 1.184 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.812, system: 0.564, elapsed: 35.025 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.552, system: 0.029, elapsed: 2.556 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.435, system: 0.051, elapsed: 14.031 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.014, elapsed: 0.332 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.755, system: 0.170, elapsed: 6.289 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.258 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.596, system: 0.482, elapsed: 20.099 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.332, system: 0.770, elapsed: 44.609 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.