Last updated on 2025-08-08 03:49:56 CEST.
| Package | ERROR | OK |
|---|---|---|
| mapi | 2 | 11 |
Current CRAN status: ERROR: 2, OK: 11
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/112s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.546, system: 0.050, elapsed: 2.060 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.911, system: 0.108, elapsed: 11.651 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.014, elapsed: 0.270 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.681, system: 0.188, elapsed: 5.325 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.239 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.034, system: 0.384, elapsed: 20.304 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.449, system: 0.029, elapsed: 1.837 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.952, system: 0.068, elapsed: 14.009 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.012, elapsed: 0.354 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.682, system: 0.159, elapsed: 6.409 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.323 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.960, system: 0.288, elapsed: 23.741 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.495, system: 0.028, elapsed: 2.257 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.983, system: 0.070, elapsed: 15.146 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.313 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.640, system: 0.177, elapsed: 5.703 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.292 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.142, system: 0.200, elapsed: 1.355 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.224, system: 0.512, elapsed: 26.224 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.462, system: 0.032, elapsed: 2.157 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.042, system: 0.083, elapsed: 12.195 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.306 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.671, system: 0.176, elapsed: 5.318 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.003, elapsed: 0.211 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.257, system: 0.475, elapsed: 13.771 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.418, system: 0.811, elapsed: 34.909 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/104s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.563, system: 0.043, elapsed: 1.891 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.811, system: 0.069, elapsed: 10.054 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.248 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.534, system: 0.185, elapsed: 5.769 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.003, elapsed: 0.301 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.776, system: 0.332, elapsed: 18.997 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.489, system: 0.027, elapsed: 2.468 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.909, system: 0.064, elapsed: 14.331 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.346 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.631, system: 0.166, elapsed: 5.911 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.005, elapsed: 0.245 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.914, system: 0.302, elapsed: 24.212 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.511, system: 0.034, elapsed: 2.141 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.905, system: 0.067, elapsed: 12.147 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.012, elapsed: 0.303 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.442, system: 0.157, elapsed: 4.925 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.002, elapsed: 0.167 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.064, system: 0.205, elapsed: 0.877 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.887, system: 0.515, elapsed: 21.441 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.487, system: 0.029, elapsed: 1.858 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.844, system: 0.055, elapsed: 11.176 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.538, system: 0.178, elapsed: 5.186 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.003, elapsed: 0.196 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.154, system: 0.551, elapsed: 13.868 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.992, system: 0.854, elapsed: 33.413 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.