Last updated on 2025-10-10 09:51:13 CEST.
| Package | ERROR | OK |
|---|---|---|
| mapi | 2 | 11 |
Current CRAN status: ERROR: 2, OK: 11
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [81s/122s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.532, system: 0.058, elapsed: 2.060 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.439, system: 0.177, elapsed: 10.406 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.018, elapsed: 0.321 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.031, system: 0.278, elapsed: 6.229 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.009, elapsed: 0.255 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.896, system: 0.568, elapsed: 19.984 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.714, system: 0.093, elapsed: 2.737 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.253, system: 0.315, elapsed: 11.502 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.018, elapsed: 0.251 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.824, system: 0.274, elapsed: 5.123 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.010, elapsed: 0.207 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.673, system: 0.743, elapsed: 20.603 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.869, system: 0.122, elapsed: 2.543 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.162, system: 0.200, elapsed: 13.564 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.012, elapsed: 0.240 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.778, system: 0.191, elapsed: 9.281 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.438 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.159, system: 0.211, elapsed: 1.270 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.938, system: 0.768, elapsed: 28.451 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.475, system: 0.037, elapsed: 2.145 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.158, system: 0.090, elapsed: 14.584 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.256 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.789, system: 0.172, elapsed: 6.386 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.003, elapsed: 0.277 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.258, system: 0.458, elapsed: 18.865 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.711, system: 0.801, elapsed: 43.541 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/106s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.493, system: 0.042, elapsed: 1.805 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.627, system: 0.087, elapsed: 9.301 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.177, system: 0.014, elapsed: 0.198 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.594, system: 0.219, elapsed: 5.118 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.010, elapsed: 0.270 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.593, system: 0.397, elapsed: 17.405 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.706, system: 0.074, elapsed: 2.568 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.184, system: 0.302, elapsed: 12.776 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.016, elapsed: 0.270 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.687, system: 0.238, elapsed: 4.864 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.008, elapsed: 0.198 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.463, system: 0.685, elapsed: 21.489 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.688, system: 0.079, elapsed: 2.098 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.075, system: 0.275, elapsed: 11.902 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.017, elapsed: 0.286 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.564, system: 0.235, elapsed: 4.519 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.018, elapsed: 0.205 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.028, system: 0.235, elapsed: 0.796 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.317, system: 0.909, elapsed: 20.620 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.452, system: 0.047, elapsed: 1.546 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.803, system: 0.250, elapsed: 10.201 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.014, elapsed: 0.215 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.548, system: 0.176, elapsed: 8.200 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.004, elapsed: 0.503 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.998, system: 0.483, elapsed: 17.221 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.757, system: 1.013, elapsed: 38.951 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.