CRAN Package Check Results for Package tornado

Last updated on 2026-10-24 05:51:29 CEST.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	0.1.3	10.23	213.42	223.65	OK
r-devel-linux-x86_64-debian-gcc	0.1.3	7.96	128.23	136.19	ERROR
r-devel-linux-x86_64-fedora-clang	0.1.3	10.00	168.57	178.57	OK
r-devel-linux-x86_64-fedora-gcc	0.1.3			153.11	OK
r-devel-windows-x86_64	0.1.3	13.00	208.00	221.00	OK
r-patched-linux-x86_64	0.1.3	9.49	200.79	210.28	OK
r-release-linux-x86_64	0.1.3	9.51	202.81	212.32	OK
r-release-macos-arm64	0.1.3	3.00	55.00	58.00	OK
r-release-macos-x86_64	0.1.3	8.00	222.00	230.00	OK
r-release-windows-x86_64	0.1.3	12.00	207.00	219.00	OK
r-oldrel-macos-arm64	0.1.3				OK
r-oldrel-macos-x86_64	0.1.3	6.00	159.00	165.00	OK
r-oldrel-windows-x86_64	0.1.3	16.00	269.00	285.00	OK

Check Details

Version: 0.1.3
Check: examples
Result: ERROR Running examples in ‘tornado-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: tornado.coxph > ### Title: Cox Proportional Hazards Tornado Diagram > ### Aliases: tornado.coxph > > ### ** Examples > > gtest <- survival::coxph(survival::Surv(stop, event) ~ rx + size + number, + survival::bladder) > torn <- tornado(gtest, modeldata = survival::bladder, type = "PercentChange", + alpha = 0.10) Error in a$specials[[i]] : subscript out of bounds Calls: tornado ... .create_plot_data -> predict -> predict.coxph -> delete.response -> off Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.1.3
Check: tests
Result: ERROR Running ‘testthat.R’ [44s/50s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > if (require(testthat)) + { + library(tornado) + + test_check("tornado") + } Loading required package: testthat Loading required package: ggplot2 Loading required package: lattice Saving _problems/test-tornado_coxph-7.R Saving _problems/test-tornado_coxph-18.R [ FAIL 2 | WARN 42 | SKIP 0 | PASS 132 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-tornado_coxph.R:6:3'): tornado.coxph works ───────────────────── <subscriptOutOfBoundsError/error/condition> Error in `a$specials[[i]]`: subscript out of bounds Backtrace: ▆ 1. ├─tornado::tornado(...) at test-tornado_coxph.R:6:3 2. └─tornado:::tornado.coxph(...) 3. └─tornado:::.create_plot_data(...) 4. ├─stats::predict(model, newdata = means, type = predict_type) 5. └─survival:::predict.coxph(model, newdata = means, type = predict_type) 6. └─stats::delete.response(Terms) 7. └─stats (local) off(a$specials[[i]]) ── Error ('test-tornado_coxph.R:17:3'): tornado.coxph works with weights ─────── <subscriptOutOfBoundsError/error/condition> Error in `a$specials[[i]]`: subscript out of bounds Backtrace: ▆ 1. ├─tornado::tornado(...) at test-tornado_coxph.R:17:3 2. └─tornado:::tornado.coxph(...) 3. └─tornado:::.create_plot_data(...) 4. ├─stats::predict(model, newdata = means, type = predict_type) 5. └─survival:::predict.coxph(model, newdata = means, type = predict_type) 6. └─stats::delete.response(Terms) 7. └─stats (local) off(a$specials[[i]]) [ FAIL 2 | WARN 42 | SKIP 0 | PASS 132 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.1.3
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘tornadoVignette.Rmd’ using rmarkdown Quitting from tornadoVignette.Rmd:195-201 [censored2] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `a$specials[[i]]`: ! subscript out of bounds --- Backtrace: ▆ 1. ├─tornado::tornado(...) 2. └─tornado:::tornado.coxph(...) 3. └─tornado:::.create_plot_data(...) 4. ├─stats::predict(model, newdata = means, type = predict_type) 5. └─survival:::predict.coxph(model, newdata = means, type = predict_type) 6. └─stats::delete.response(Terms) 7. └─stats (local) off(a$specials[[i]]) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tornadoVignette.Rmd' failed with diagnostics: subscript out of bounds --- failed re-building ‘tornadoVignette.Rmd’ SUMMARY: processing the following file failed: ‘tornadoVignette.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc