Imports: grid
Suggests: ggplot2, knitr, lattice, rmarkdown, testthat

Suggests: testthat, knitr, rmarkdown, WikipediR, WikidataR

Depends: R (>= 3.5.0), Matrix, igraph
Imports: dendsort, drat, fastcluster, graphics, grDevices, irlba,
magrittr, MASS, mgcv, methods, N2R, parallel, plyr, R.utils,
Rcpp, rjson, rlang, R6, RMTstat, Rook, Rtsne, sccore (>=
0.1.1), stats, urltools, utils
LinkingTo: Rcpp, RcppArmadillo, RcppProgress, RcppEigen
Suggests: AnnotationDbi, base64enc, BiocGenerics, BiocParallel,
colorRamps, data.table, dbscan, dplyr, ggplot2, GO.db,
gridExtra, KernSmooth, knitr, org.Dr.eg.db, org.Hs.eg.db,
org.Mm.eg.db, pcaMethods, pheatmap, rgl, rmarkdown, robustbase,
scde, testthat, uwot

Depends: R (>= 3.5.0), S4Vectors, Biostrings, ggplot2
Imports: R6, reshape2, vegan, GenomicRanges, BiocGenerics,
shinyWidgets, shinydashboard, DT, plotly, magrittr, heatmaply,
dendextend, ggfortify, shiny
Suggests: micropan, patchwork, ape, phangorn, pegas, DECIPHER,
rhierbaps, IRanges, knitr, rmarkdown, testthat, covr

Suggests: knitr, patchwork, spelling, rmarkdown

Depends: TSP,gtools, graph, methods
Suggests: knitr, rmarkdown, Sleuth3, colorspace,multcomp,igraph,
scales,RColorBrewer,alr4,scagnostics

Imports: graphics, stats, boot, MASS, mcprofile

Depends: R (>= 4.1)
Imports: TeachingDemos, rioja, mgcv, MASS, tibble, dplyr, magrittr,
ggplot2, forcats (>= 1.0.0), assertr, vegan, rlang, ggrepel,
tidyr, purrr (>= 1.0.0)
Suggests: units, knitr, rmarkdown, gstat, sf, analogue, testthat (>=
3.0.0)

Depends: R (>= 4.0)
Imports: stats, utils, graphics, methods, curl, ape, sf, stringdist,
geosphere, h3jsr (>= 1.3.0), httr, pbapply
Suggests: rmarkdown, knitr, testthat (>= 3.0.0), vdiffr (>= 1.0.0),
paleotree, phytools, covr

Imports: curl, graphics, grDevices, gtools, maps, rjson, terra

Suggests: ape, fitdistrplus, knitr, rmarkdown

Suggests: testthat (>= 3.0.0), strap, divDyn, ggplot2, knitr, rmarkdown

Imports: phangorn (>= 2.6.3), stats, phytools (>= 0.6-00), jsonlite,
graphics, grDevices, methods, png, RCurl, utils