Allow users to obtain basketball statistics for 
    the Australian basketball league 'NBL'<https://nbl.com.au/>. 
    Stats include play-by-play, shooting locations, results and 
    box scores for teams and players.

Perform non-bipartite matching and matched randomization. A
    "bipartite" matching utilizes two separate groups, e.g. smokers being
    matched to nonsmokers or cases being matched to controls. A "non-bipartite"
    matching creates mates from one big group, e.g. 100 hospitals being
    randomized for a two-arm cluster randomized trial or 5000 children who
    have been exposed to various levels of secondhand smoke and are being
    paired to form a greater exposure vs. lesser exposure comparison. At the
    core of a non-bipartite matching is a N x N distance matrix for N potential
    mates. The distance between two units expresses a measure of similarity or
    quality as mates (the lower the better). The 'gendistance()' and
    'distancematrix()' functions assist in creating this. The 'nonbimatch()'
    function creates the matching that minimizes the total sum of distances
    between mates; hence, it is referred to as an "optimal" matching. The
    'assign.grp()' function aids in performing a matched randomization. Note
    bipartite matching can be performed using the prevent option in
    'gendistance()'.

Negative Binomial (NB) models for two-group comparisons and
    regression inferences from RNA-Sequencing Data.

An implementation of network-based statistics in R using mixed effects models.
    Theoretical background for Network-Based Statistics can be found in Zalesky et al. (2010)
    <doi:10.1016/j.neuroimage.2010.06.041>. For Mixed Effects Models check the
    R package <https://CRAN.R-project.org/package=nlme>.

An interactive document on  the topic of naive Bayes classification  analysis using 'rmarkdown' and 'shiny' packages. Runtime examples are provided in the package function as well as at  <https://kartikeyab.shinyapps.io/NBShiny/>.

Estimates the relative transmission probabilities between cases in an infectious disease outbreak or cluster using naive Bayes. Included are various functions to use these probabilities to estimate transmission parameters such as the generation/serial interval and reproductive number as well as finding the contribution of covariates to the probabilities and visualizing results. The ideal use is for an infectious disease dataset with metadata on the majority of cases but more informative data such as contact tracing or pathogen whole genome sequencing on only a subset of cases. For a detailed description of the methods see Leavitt et al. (2020) <doi:10.1093/ije/dyaa031>.