Depends: R (>= 3.1.0), dirmult
Imports: ggplot2, stats, foreach, doParallel, MASS, vegan, gplots,
rpart, rpart.plot, parallel, graphics, lattice

Depends: R (>= 3.0.0)
Imports: ape, HMP, dirmult, doParallel, foreach, parallel, stats,
graphics

Imports: lifecycle, methods, pkgconfig, rlang (>= 1.0.2), vctrs (>=
0.3.8)
Suggests: crayon, lubridate, pillar (>= 1.1.0), testthat (>= 3.0.0)

Imports: abind, ape, BayesLogit, fields, FNN, ggplot2, MASS, Matrix,
matrixStats, MCMCpack, methods, nnet, rlang, parallel, pracma,
pROC, sp, statmod, truncnorm

Imports: GA, msm, methods, uuid, graphics
Suggests: testthat (>= 3.0.0), ecr, filelock, parallel, doParallel,
grDevices, smoof

Depends: R (>= 3.5.0), stats, graphics, Matrix, pROC

Imports: NMF, oro.nifti, tcltk, nnls, rasterImage, stats, graphics,
grDevices, MASS

Depends: R (>= 3.0.0), MASS (>= 7.3-35), methods, graphics, stats
Suggests: lme4, gamlss, gamlss.dist, pscl, nnet, aods3, VGAM, glmmADMB,
latticeExtra

Depends: R (>= 4.0.0)
Imports: ggplot2, lubridate, tools, readr, dplyr, tidyr, patchwork,
scales, rvest, tibble, treemapify, RColorBrewer, jsonlite
Suggests: rmarkdown, knitr, spelling, viridisLite

Depends: R (>= 3.6)
Imports: dplyr, ggplot2, magrittr, RColorBrewer, readr, ini, qqman,
data.table, RecordLinkage

Depends: R (>= 3.5.0), ROI.plugin.ecos
Imports: slam, checkmate, MASS, SuppDists, ROI (>= 0.3-0)
Suggests: ROI.plugin.scs, tinytest (>= 1.0.0), parallel, knitr,
rmarkdown, bookdown, DiagrammeR

Depends: R (>= 3.5.0), stats, utils, MplusAutomation, mvtnorm

Imports: dplyr, tibble, MASS, purrr, rlang, assertthat
Suggests: testthat, covr, knitr, rmarkdown, mice, ggplot2

Depends: R (>= 4.0)
Imports: bs4Dash (>= 2.0.2), config, dplyr, DT, ggplot2, golem, igraph,
openxlsx, readxl, shiny (>= 1.6.0), shinyalert, shinybusy,
shinyjs, shinyvalidate, shinyWidgets, stringr, tippy,
visNetwork, mixOmics, BiocParallel, markdown
Suggests: bookdown, knitr, rmarkdown, badger

Depends: R (>= 3.0.2)
Imports: graphics, stats, ape, scatterplot3d, grDevices

Depends: R (>= 4.0.0)
Imports: cli (>= 1.1.0), data.table (>= 1.14.0), dplyr, furrr, future,
glue, httr (>= 0.5), janitor, jsonlite, lubridate, magrittr,
progressr (>= 0.6.0), purrr (>= 0.3.0), Rcpp (>= 1.0.7),
RcppParallel (>= 5.1.4), rlang (>= 0.4.0), rvest (>= 1.0.0),
stringr (>= 1.3.0), tidyr (>= 1.0.0), usethis (>= 1.6.0)
Suggests: crayon (>= 1.3.4), curl, DBI, ggplot2, ggrepel, qs (>=
0.25.1), rmarkdown, RSQLite, stats, stringi, testthat, tibble
(>= 3.0), xml2 (>= 1.3), yaml