Imports: DiagrammeR, dplyr, purrr, stats, utils
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)

Suggests: whoami (>= 1.1.0), tinytest, roxygen2

Depends: R (>= 3.4.0)
Imports: cli (>= 3.3.0), crayon, desc, fs, glue, methods, pkgbuild,
rlang (>= 1.1.1), rprojroot, utils, withr (>= 2.4.3)
Suggests: bitops, covr, mathjaxr, mockr, pak, Rcpp, remotes,
rstudioapi, testthat (>= 3.1.0)

Depends: R (>= 3.0.0), methods, stats, registry
Imports: tools, grDevices, utils, graphics, codetools, digest, stringr,
xtable, withr, assertthat
Suggests: devtools (>= 0.8), roxygen2, RUnit, testthat, knitr,
rmarkdown, markdown (>= 1.3), yaml, Biobase, datasets,
rbibutils (>= 1.3)

Depends: R (>= 4.0.0)
Imports: ComplexHeatmap (>= 2.6.0), GetoptLong, GlobalOptions, utils,
grid, hash, methods, BiocManager, brew, BiocVersion
Suggests: knitr, rmarkdown, svglite, callr, rjson, Rook, igraph,
ggplot2, ggrepel, base64, testthat, cowplot

Imports: assertthat, covr, data.table, DT, futile.logger, glue, igraph,
knitr, magrittr, methods, R6, rlang, rmarkdown(>= 1.9), tools,
visNetwork
Suggests: ggplot2, pkgdown, testthat, webshot, withr

Imports: utils
Suggests: commonmark, httr, xml2, covr, testthat

Imports: curl, jsonlite
Suggests: covr, memoise, mockery, pillar, pingr (>= 2.0.0), rstudioapi,
shiny, shinyjs, shinyWidgets, testthat (>= 3.0.0), whoami,
withr

Imports: checkmate, dplyr (>= 0.5.0), digest, nlme, purrr, rlang,
stats, tidyr, tibble, utils
Suggests: covr, cowplot, ggplot2, knitr, labeling, pander, pmxTools,
rmarkdown, spelling, testthat (>= 3.0.0), units, withr

Depends: R (>= 3.0.2)
Imports: Rcpp (>= 0.12.9), BH, data.table, stringr, MASS, randtoolbox,
jsonlite, stats, parallel, magrittr
LinkingTo: BH, Rcpp (>= 0.12.9)
Suggests: httr, testthat (>= 3.0.0), mockery, knitr, rmarkdown

Depends: R (>= 2.0.0), foreign, binr, forestplot, rtf

Depends: R (>= 4.1)
Imports: ggplot2, data.table, deSolve, foreach, parallel, doParallel
Suggests: covr, knitr, httk, rmarkdown, testthat

Depends: R (>= 4.0.0)
Imports: cli, stringr, readr, dplyr (>= 1.0.0), tinytiger, sf, withr,
httr
Suggests: testthat (>= 3.0.0), lifecycle, knitr, rmarkdown, ggplot2