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Functions for Accurate and Speedy linkage map construction, manipulation and diagnosis of Doubled Haploid, Backcross and Recombinant Inbred 'R/qtl' objects. This includes extremely fast linkage map clustering and optimal marker ordering using 'MSTmap' (see Wu et al.,2008).
| Version: | 1.0-8 |
| Depends: | R (≥ 3.0.0), qtl, lattice |
| Imports: | fields, RColorBrewer, gtools |
| Suggests: | knitr, formatR, digest |
| Published: | 2024-11-01 |
| DOI: | 10.32614/CRAN.package.ASMap |
| Author: | Julian Taylor [aut, cre], David Butler. [aut] |
| Maintainer: | Julian Taylor <julian.taylor at adelaide.edu.au> |
| BugReports: | https://github.com/DrJ001/ASMap/issues |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | https://github.com/DrJ001/ASMap |
| NeedsCompilation: | yes |
| Citation: | ASMap citation info |
| Materials: | README NEWS |
| In views: | Agriculture |
| CRAN checks: | ASMap results |
| Reference manual: | ASMap.pdf |
| Vignettes: |
Efficient linkage map construction using R/ASMap (source, R code) |
| Package source: | ASMap_1.0-8.tar.gz |
| Windows binaries: | r-devel: ASMap_1.0-8.zip, r-release: ASMap_1.0-8.zip, r-oldrel: ASMap_1.0-8.zip |
| macOS binaries: | r-release (arm64): ASMap_1.0-8.tgz, r-oldrel (arm64): ASMap_1.0-8.tgz, r-release (x86_64): ASMap_1.0-8.tgz, r-oldrel (x86_64): ASMap_1.0-8.tgz |
| Old sources: | ASMap archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.