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fixed the bug when there are more than 10 treatments for dunnett function
The summarize_conj function has been implemented. So far, it is limited to summarizing the main analysis of variance framework, in addition to returning the QMres ratio and the means test when the assumptions for jointly analyzing the data are met.
the fat2_table function was implemented to facilitate the generation of dynamic documents for tests in a factorial scheme with two factors or split plot
The grid_onefactor function was implemented to group graphs of DIC, DBC and DQL outputs. It is possible to join up to six graphs in one figure.
The correlation function has been improved
Fixed test_two function bug for paired data.
Implemented the option to merge non-parametric and parametric tests in barplot_positive
Fixed the following error: The Scott-Knott test failed when data are transformed for factorial and split-plot schemes.
As suggested by users, the names.factor argument was implemented to change the name of factors in the output of functions that encompass more than one factor
Fixed function summarise_anova in case of analysis using kruskal-wallis test
Fixed residual graph bug for FAT2DIC, FAT2DBC, PSUBDIC, PSUBDBC, FAT2DIC.ad, FAT2DBC.ad, FAT3DIC, FAT3DBC, FAT3DIC.ad, FAT3DBC .ad when data is unsorted or ordered by block.
ylim argument have been implemented in dic, dbc and dql function.
fixed bug when transf is set to “angular”
Sum of a constant is now available in all experimental projects
dic.ad and dbc.ad function bug fixed
Added to quantfat2desd and jointcluster functions
The conjdic and conjdbc functions have been improved
fix a bug in barplot_positive
Fixed DIC, DBC and DQL function bug when point=“mean_se” and factor is qualitative
Now point in the FAT2DIC, FAT2DBC, FAT2DIC.ad, FAT2DBC.ad, FAT3DIC, FAT3DBC, FAT3DIC.ad, FAT3DBC.ad, PSUBDIC and PSUBDBC functions use the point argument (“mean_sd” or “mean_se”) to define the information that will be used in the error bars in qualitative factors.
FAT2DBC.ad function sum of squares and degree of freedom bug fixed
The conjfat2dbc function has been implemented
The dic.ad and dbc.ad function has been implemented
The shiny app has been translated into English
Fixed sk_graph function offset
Added ibarplot_double function
Added bargraph2 function
plot_jitter has been improved
fixed significance level bug for Dunnett’s test (dunnett function)
Fix a bug standard residuals graph in functions FAT2DIC, FAT2DBC, FAT2DIC.ad, FAT2DBC.ad, FAT3DIC, FAT3DBC, FAT3DIC.ad, FAT3DBC.ad, PSUBDIC and PSUBDBC
fix a bug in double interaction significant in FAT3DIC,FAT3DBC,FAT3DIC.ad and FAT3DIC.ad
The sorting bug in the case of factorial designs including functions FAT2DIC, FAT2DBC, FAT2DIC.ad, FAT2DBC.ad, FAT3DIC, FAT3DBC, FAT3DIC.ad, FAT3DBC.ad, PSUBDIC and PSUBDBC has been fixed. Now the final worksheet, when meaningful interaction doesn’t go wrong when the user supplies input parameters in a disorderly fashion.
axissize argument has been added to the sketch function
summarise_dunnett has been added
Add labelsize argument in FAT2DIC, FAT2DBC, PSUBDIC, PSUBDBC, FAT3DIC, FAT3DBC, FAT2DIC.ad, FAT2DBC.ad, FAT3DIC.ad and FAT3DBC.ad
Add xlab.factor argument in FAT2DIC, FAT2DBC, PSUBDIC, PSUBDBC, FAT3DIC, FAT3DBC, FAT2DIC.ad, FAT2DBC.ad, FAT3DIC.ad and FAT3DBC.ad
The output of the desc3fat function has been improved
The sketch of a strip-plot has been added to the sketch function
Analysis of variance of the strip-plot scheme has been added in STRIPLOTfunction
It is now possible to add the degree of the polynomial for each type of interaction in the case of quantitative factor.
The bargraph_onefactor and bargraph_twofactor functions have been implemented
The bug of sorting to FAT3DBC in case of significant interaction has been fixed
The FAT2DIC.art and FAT2DBC.art functions have been discontinued
Dependencies ARTool, reshape2, Hmisc, stringr and ScottKnott have been removed
Bug fixing conjdic and conjdbc functions for linux
The .welcome startup function has been removed
The dunn function has been added.
LSD testing on FAT2DBC was added
Dependence on the grid and gridExtra packages have been removed. Functions with more than one graph are now joined by the cowplot package.
Added add.letters argument in DICT, DBCT and DQLT function.
Added the soybean dataset
Added the bean dataset
Added the corn dataset
Added the covercrops dataset
Added the orchard dataset
Added the pepper dataset
The summarise_anova function was implemented, which performs a summary of the outputs of the DIC, DBC and DQL functions, when the factor is qualitative. In the case of FAT2DIC, FAT2DBC, PSUBDIC and PSUBDBC a summary of the analysis of variance frame is returned.
Fixed bug of conjdic and conjdbc functions in case of analysis of separate experiments.
Now for DIC, DBC, DQL, FAT2DIC, FAT2DBC, FAT3DIC and FAT3DBC functions, the standardized residual graph is returned in list form, before the graphs.
The standardized residual graph for the PSUBDIC and PSUBDBC functions was implemented
Scott-Knott’s test has been improved. Now composite names can be used in factor vectors.
Fixed the FAT2DIC.art function bug
PCA_function function was implemented
Correction of CV for FAT2DIC and FAT2DBC. Before, I was extracting the QM from the interaction by making the QM from the residue.
The transf function suggestion issue has been fixed.
The linesize argument was implemented in polynomial, polynomial2 and polynomial2_color
Added the emerge dataset
TBARPLOT.reverse function was implemented
FAT2DIC.ad and FAT2DBC.ad function was implemented
The polynomial and polynomial2 functions have been improved
When a significant double interaction is found when one of the factors is quantitative, it now performs multiple comparisons of the other factor within each level of the quantitative factor.
The PSUBSUB function bugs have been fixed. In addition, the function returns breakdown of the analysis of variance, assumptions, and additional information.
dunnett function was implemented
cor_ic function was implemented
bar_graph function was implemented
seg_graph function was implemented
The graphical output of the conjdic and conjdbc functions has been changed. It is now possible to use the outputs of these functions in sk_graph, radargraph and barplot_positive.
Now FAT2DIC, FAT2DBC, PSUBDIC, PSUBDBC, FAT3DIC and FAT3DBC can be used in the sk_graph, radargraph and barplot_positive commands, in cases of significant isolated effect.
More graphical arguments were added to the commands, such as angle.label.
The layout of the variance analysis output in the conjdic and conjdbc commands has been changed.
The variation coefficient (CV %) was added in the DICT, DBCT and DQLT functions.
Analysis using a generalized linear model of the binomial or poisson family was added for a completely randomized design (DIC.glm) in randomized blocks (DBC.glm) with a factor of interest.
Additional information was inserted in FAT2DIC, FAT2DBC, FAT3DIC and FAT3DBC.
plot_cor function has been added.
plot_jitter function has been added.
Graphics themes default has been changed from theme_bw to theme_classic.
The graphical output of standardized graphics residues for ggplot2 has been changed.
The aristolochia dataset has been added
The aacp function has been added, which calculates the area under the progress curve
The bar width error in the polynomial and polynomial2 commands has been fixed and can now be defined by the width.bar argument.
The mean and general median of the DIC, DBC and DQL commands have been corrected. The function returned the measurements of the transformed data.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.