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synergy_plot_bycomp()
to create plots for
2D cross-section of response surfaces from different null modelsplot.effect-size
and
plotResponseSurface
functionsrgl
to plotly
for the 3D
plotsrgl.*
functions due to upcoming deprecation in
the rgl
packageFix vignettes to avoid CRAN warnings on systems without pandoc or webshot2
Make sure NAs in bootConfint are handled
Residual resampling according to mean-variance trend
Use bootstrapped confidence intervals for point-by-point and overall effect sizes
Internal redesign for speed-up, using “d1d2” identifiers
generalizedLoewe
and hsa
functions when data is a tibbleshow smooth prediction curve on the marginal fit plot
show warning for agonist/antagonist combination when using generalized Loewe model
even better support for flat monotherapies, consistent calls/colors for all representations (contour plot, summary table and 3d plot)
added clarification to description of Bliss method in the “Methodology” vignette
fixed typos
show EC50 in log10 terms for monotherapy summary
allow custom compound names for plotting
added reference to the original article
fix DESCRIPTION file according to new R CMD check policy
isobologram() plot is now available for ResponseSurface objects It is also now included in the shiny app.
summary.ResponseSurface does not fail if marginal fits have constraints
Change of package maintainer
Contour plot for maxR now has correct p-value labels
Summary for marginal fits does not fail if Hessian computation failed
predict
method added for the MarginalFit objectsThese binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.