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BIGr 0.3.3
- Adapt updog2vcf to model f1, f1pp, s1 and s1pp
BIGr 0.3.2
- updog2vcf function option to output compressed VCF (.vcf.gz) - set
as default
- remove need for defining ploidy
- add metadata at the VCF header
BIGr 0.5.0
- Add imputation_concordance function to estimate accuracy of imputed
and original dataset
- Add get_OffTargets function to extract target and off-target SNPs
from a MADC file
- Add merge_MADCs function to merge two or more MADC files
together
- Improved documentation and examples for all functions
- Add tests for all functions
BIGr 0.5.1
- Improvements of testthat tests
- Add check_replicates and check_homozygous_trios for pedigree
relationship quality check
BIGr 0.5.2
- madc2vcf function changed to madc2vcf_targets
- get_OffTargets function changed to madc2vcf_all
- Updates to testthat tests and function examples
BIGr 0.5.3
- Updated madc2vcf_all example
BIGr 0.5.4
- Updated dosage2vcf example
BIGr 0.5.5
- Updated DESCRIPTION
- Added return value for merge_MADCs
- Added optional seed for check_ped
- Added verbose option
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.