The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.
NOTE: for more news about the package, see
https://github.com/florianhartig/BayesianTools/releases
This release was necceessary to make BT compatible with new CRAN
policies, in particular a switch to HTML5 for documentation pages
Bugfixes
- fixes HTML validation problems connected to the recent switch to
HTML5 for documentation pages in R 4.2
https://github.com/florianhartig/BayesianTools/issues/240.
- fixes detritus problems under Windows dev, which, after a long
search, turned up to be caused by some stray parallel notes
https://github.com/florianhartig/BayesianTools/issues/244
Minor changes
- Help improvements and clarifications
The release was neccessary because of a change to CRAN, see
https://github.com/florianhartig/BayesianTools/issues/191
Bugfixes
- fixed HTML validation problems due to the recent switch to HTML5 for
documentation pages in R 4.2.0, see also
https://github.com/florianhartig/BayesianTools/issues/240
- some other small bugfixes
New features
- calibrationTest + helper functions to test for
https://github.com/florianhartig/BayesianTools/pull/172
Major changes
Minor changes
- Help improvements and clarifications
Bugfixes
- Bugfix AR1 likelihood
https://github.com/florianhartig/BayesianTools/issues/169
- Bugfix restart MCMC
https://github.com/florianhartig/BayesianTools/issues/158
- bugfix for new behavior of class(matrix) in CRAN devel, see
https://github.com/florianhartig/BayesianTools/issues/191
Changes / improvements
- marginalPlot changed / updated
Minor changes
- getSample behavior
https://github.com/florianhartig/BayesianTools/issues/133
- Create a check of start values / check matrix at the runMCMC level
https://github.com/florianhartig/BayesianTools/issues/114
Bugfixes:
- Removed package dependency in unit tests
https://github.com/florianhartig/BayesianTools/issues/136
- Bugfix in bridge sampling
https://github.com/florianhartig/BayesianTools/issues/121
- Missing -Inf -> - Inf check in DEzs and DREAMzs with parallel = T
https://github.com/florianhartig/BayesianTools/issues/113
Compatibility
- added NIMBLE support to getSample and plotting functions
- added coda support to plotTimeSeriesResults and plotMarginals
Changes
- IMPORTANT: added a warning when calling runMCMC with the “twalk”
sampler. At the moment, using this sampler is discouraged
- marginalPlot can now plot prior and/or posterior, either as
histogram or as violin plots
- added bridge sampling to marginalLikelihood
- added shortcuts for AM, DR and DRAM samplers
Bugfixes:
- when calling getSample on mcmcSamplerList, the chains are now merged
instead of concatenated
- formulas in the vignette are now rendered correctly
- fixed a bug in VSEM help
Minor Changes:
- changed the ordering of the summary metrics of summary.mcmcSampler,
and summary.mcmcSamplerList
- renamed marginalLikelihood output to “ln.ML”
- added tests for plotTimeSeriesResults, marginalPlot and
marginalLikelihood
- added an example with restart to DEzs
Compatibility
- created compatibility to new Rcpp standard
Changes
- getSample extended to coda objects, so that all plot functions can
also be used on coda objects
- plotTimeSeriesResults now includes the option to create residual
plots from posterior predictive simulations, calling the DHARMa
package
- added new utitility functions sampleEquallySpaced and
correctThin
Bugfixes
- IMPORTANT: fixed a bug in createPriorDensity - results with
createPriorDensity prior to this bugfix may be unrealiable
- getSample now corrects wrong inputs for thin and numSamples instead
of throwing an error
- smaller bugfixes in plot functions
Bugfixes
- various smaller improvement / bugfixes in getSample, plot functions
/ Help (0.1.2)
- warnings / bugfixes associated to burnin arguments (0.1.1.2)
- bugfix in marginal plots (0.1.1.1)
Mostly a bugfix release
Minor changes
- implemented method for estimating posterior volume (0.1.0.1)
- implemented GOF (0.1.0.2)
Bugfixes
- removed erroneously created help files (0.1.0.1)
- dynload change to conform to R 3.4.x requirements (0.1.1)
- smaller bugxfixes and help updates (0.1.1)
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.