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Variable selection methods are provided for several classification methods: the lasso/elastic net, PCLDA, PLSDA, and several t-tests. Two approaches for selecting cutoffs can be used, one based on the stability of model coefficients under perturbation, and the other on higher criticism.
| Version: | 0.4.5 |
| Depends: | pls, glmnet, MASS, st (≥ 1.1.6) |
| Published: | 2015-09-07 |
| DOI: | 10.32614/CRAN.package.BioMark |
| Author: | Ron Wehrens, Pietro Franceschi |
| Maintainer: | Ron Wehrens <ron.wehrens at gmail.com> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | no |
| Citation: | BioMark citation info |
| Materials: | NEWS |
| In views: | ChemPhys |
| CRAN checks: | BioMark results |
| Reference manual: | BioMark.pdf |
| Package source: | BioMark_0.4.5.tar.gz |
| Windows binaries: | r-devel: BioMark_0.4.5.zip, r-release: BioMark_0.4.5.zip, r-oldrel: BioMark_0.4.5.zip |
| macOS binaries: | r-release (arm64): BioMark_0.4.5.tgz, r-oldrel (arm64): BioMark_0.4.5.tgz, r-release (x86_64): BioMark_0.4.5.tgz, r-oldrel (x86_64): BioMark_0.4.5.tgz |
| Old sources: | BioMark archive |
| Reverse suggests: | biosigner |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.