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CHMM: Coupled Hidden Markov Models

An exact and a variational inference for coupled Hidden Markov Models applied to the joint detection of copy number variations.

Version: 0.1.1
Depends: R (≥ 3.1.0)
Imports: mclust
Published: 2017-09-29
DOI: 10.32614/CRAN.package.CHMM
Author: Xiaoqiang Wang [aut], Julie Aubert [aut, cre]
Maintainer: Julie Aubert <julie.aubert at agroparistech.fr>
BugReports: http://github.com/julieaubert/CHMM/issues
License: GPL-2
URL: http://github.com/julieaubert/CHMM
NeedsCompilation: yes
CRAN checks: CHMM results

Documentation:

Reference manual: CHMM.pdf

Downloads:

Package source: CHMM_0.1.1.tar.gz
Windows binaries: r-devel: CHMM_0.1.1.zip, r-release: CHMM_0.1.1.zip, r-oldrel: CHMM_0.1.1.zip
macOS binaries: r-release (arm64): CHMM_0.1.1.tgz, r-oldrel (arm64): CHMM_0.1.1.tgz, r-release (x86_64): CHMM_0.1.1.tgz, r-oldrel (x86_64): CHMM_0.1.1.tgz
Old sources: CHMM archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.