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CRMetrics 0.3.3

• Added functionality for 10x Flex, Parse, 10x multiome
• Added ‘technology’ flag when creating R6 object
• Added plotBarcodeRankPlot
• Added plotRawDepth
• Added ‘depth.cutoff.upper’ flag for plotEmbedding, plotFilteredCells, filterCms

CRMetrics 0.3.2

• Fixed error in plotFilteredCells
• Added author e-mail (missing)

CRMetrics 0.3.1

• Minor bug fix for issue #52

CRMetrics 0.3.0

• Several minor bug fixes
• Updated createEmbedding upon resolve of https://github.com/kharchenkolab/conos/issues/123
• Updated DESCRIPTION
• Added checks for detectDoublets
• Added possibility for multiple paths for “data.path” argument in initialize
• Changed depth calculation from Conos depth to raw depth, i.e., column sums
• Added plotting palette to object through argument pal
• Fixed bug for filterCms where species was not forwarded to getMitoFraction internally
• Moved adding list of CMs to CRMetrics object from addDetailedMetrics() to addCms() since this is more logical
• detectDoublets can now export Python script with argument export = TRUE
• Added addDoublets function to add doublet results generated with exported Python scripts
• Updated vignette

CRMetrics 0.2.3

• Updated tests and examples to pass CRAN checks

CRMetrics 0.2.2

• Prepared for submission to CRAN

CRMetrics 0.2.1

• Added a NEWS.md file to track changes to the package.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.