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ChemoSpec
is a collection of functions for top-down
exploratory data analysis of spectral data including nuclear magnetic
resonance (NMR), infrared (IR), Raman, X-ray fluorescence (XRF) and
other similar types of spectroscopy. Includes functions for plotting and
inspecting spectra, peak alignment, hierarchical cluster analysis (HCA),
principal components analysis (PCA) and model-based clustering. Robust
methods appropriate for this type of high-dimensional data are
available. ChemoSpec
is designed for structured
experiments, such as metabolomics investigations, where the samples fall
into treatment and control groups. Graphical output is formatted
consistently for publication quality plots. ChemoSpec
is
intended to be very user friendly and to help you get usable results
quickly. A vignette covering typical operations is available.
Learn more about ChemoSpec
chooseCRANmirror() # choose a CRAN mirror
install.packages("ChemoSpec")
library("ChemoSpec")
install.packages("remotes")
library("remotes")
install_github(repo = "bryanhanson/ChemoSpec@main")
library("ChemoSpec")
If you use @some_other_branch
you can download other
branches that might be available. They may or may not pass CRAN checks
and thus may not install automatically using the method above. Check the
NEWS file to see what’s up.
ChemoSpec
requires ChemoSpecUtils
to work.
It should install automatically, but if not, you can use a command
similar to the above to install it.
To access the vignettes, use the following, or visit here.
browseVignettes("ChemoSpec")
This project is released with a Contributor Code of Conduct. By contributing, you agree to abide by its terms.
If you would like to contribute to the project, please see Contributing Guide.
ChemoSpec
is distributed under the GPL-3 license, as
stated in the DESCRIPTION file. For more info, see the GPL site.
Questions? hanson@depauw.edu
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.