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FinePop: Fine-Scale Population Analysis

Statistical tool set for population genetics. The package provides following functions: 1) empirical Bayes estimator of Fst and other measures of genetic differentiation, 2) regression analysis of environmental effects on genetic differentiation using bootstrap method, 3) interfaces to read and manipulate 'GENEPOP' format data files and allele/haplotype frequency format files.

Version: 1.5.2
Depends: R (≥ 4.0.0)
Suggests: ape
Published: 2024-03-15
DOI: 10.32614/CRAN.package.FinePop
Author: Reiichiro Nakamichi, Hirohisa Kishino, Shuichi Kitada
Maintainer: Reiichiro Nakamichi <nakamichi_reiichiro33 at fra.go.jp>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2.0)]
NeedsCompilation: no
CRAN checks: FinePop results

Documentation:

Reference manual: FinePop.pdf

Downloads:

Package source: FinePop_1.5.2.tar.gz
Windows binaries: r-devel: FinePop_1.5.2.zip, r-release: FinePop_1.5.2.zip, r-oldrel: FinePop_1.5.2.zip
macOS binaries: r-release (arm64): FinePop_1.5.2.tgz, r-oldrel (arm64): FinePop_1.5.2.tgz, r-release (x86_64): FinePop_1.5.2.tgz, r-oldrel (x86_64): FinePop_1.5.2.tgz
Old sources: FinePop archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.