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First release.
simulate_population(),
qc_markers(), impute_markers(),
Gmatrix() (VanRaden), and gblup() (GBLUP by
REML, validated against rrBLUP::mixed.solve).gs_fit() /
predict() covering GBLUP, elastic net
(glmnet), random forest (ranger) and gradient
boosting (xgboost).gs_cv() for breeding-relevant cross-validation (random
k-fold and leave-one-group-out).gs_ensemble(), a stacked super-learner combining base
models with non-negative, out-of-fold-fitted weights.gs_benchmark() with
print/summary/plot to compare all
available models under one cross-validation.These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.