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Provides two methods for automatic calculation of gene scores from gene count tables: the z-score method, which requires a table of samples being scored and a count table with control samples, and the geometric mean method, which does not rely on control samples. The mathematical methods implemented are described by Kim et al. (2018) <doi:10.1089/jir.2017.0127>.
| Version: | 0.1.1 |
| Published: | 2024-10-25 |
| DOI: | 10.32614/CRAN.package.GeneScoreR |
| Author: | Aris Syntakas [aut, cre] |
| Maintainer: | Aris Syntakas <sejjsyn at ucl.ac.uk> |
| License: | MIT + file LICENSE |
| NeedsCompilation: | no |
| CRAN checks: | GeneScoreR results |
| Reference manual: | GeneScoreR.pdf |
| Package source: | GeneScoreR_0.1.1.tar.gz |
| Windows binaries: | r-devel: GeneScoreR_0.1.1.zip, r-release: GeneScoreR_0.1.1.zip, r-oldrel: GeneScoreR_0.1.1.zip |
| macOS binaries: | r-release (arm64): GeneScoreR_0.1.1.tgz, r-oldrel (arm64): GeneScoreR_0.1.1.tgz, r-release (x86_64): GeneScoreR_0.1.1.tgz, r-oldrel (x86_64): GeneScoreR_0.1.1.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.