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HMPTrees: Statistical Object Oriented Data Analysis of RDP-Based Taxonomic Trees from Human Microbiome Data

Tools to model, compare, and visualize populations of taxonomic tree objects.

Version: 1.4
Depends: R (≥ 3.0.0)
Imports: ape, HMP, dirmult, doParallel, foreach, parallel, stats, graphics
Published: 2017-07-05
DOI: 10.32614/CRAN.package.HMPTrees
Author: Patricio S. La Rosa, Elena Deych, Berkley Shands, William D. Shannon
Maintainer: Berkley Shands <rpackages at biorankings.com>
License: Apache License (== 2.0)
NeedsCompilation: no
Materials: NEWS
In views: Phylogenetics
CRAN checks: HMPTrees results

Documentation:

Reference manual: HMPTrees.pdf
Vignettes: Categorical FDA Tutorial

Downloads:

Package source: HMPTrees_1.4.tar.gz
Windows binaries: r-devel: HMPTrees_1.4.zip, r-release: HMPTrees_1.4.zip, r-oldrel: HMPTrees_1.4.zip
macOS binaries: r-release (arm64): HMPTrees_1.4.tgz, r-oldrel (arm64): HMPTrees_1.4.tgz, r-release (x86_64): HMPTrees_1.4.tgz, r-oldrel (x86_64): HMPTrees_1.4.tgz
Old sources: HMPTrees archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.