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JSparO: Joint Sparse Optimization via Proximal Gradient Method for Cell Fate Conversion

Implementation of joint sparse optimization (JSparO) to infer the gene regulatory network for cell fate conversion. The proximal gradient method is implemented to solve different low-order regularization models for JSparO.

Version: 1.5.0
Depends: R (≥ 4.0.0)
Imports: pracma
Published: 2022-08-18
DOI: 10.32614/CRAN.package.JSparO
Author: Xinlin Hu [aut, cre], Yaohua Hu [cph, aut]
Maintainer: Xinlin Hu <thompson-xinlin.hu at connect.polyu.hk>
License: GPL (≥ 3)
NeedsCompilation: no
In views: Omics
CRAN checks: JSparO results

Documentation:

Reference manual: JSparO.pdf

Downloads:

Package source: JSparO_1.5.0.tar.gz
Windows binaries: r-devel: JSparO_1.5.0.zip, r-release: JSparO_1.5.0.zip, r-oldrel: JSparO_1.5.0.zip
macOS binaries: r-release (arm64): JSparO_1.5.0.tgz, r-oldrel (arm64): JSparO_1.5.0.tgz, r-release (x86_64): JSparO_1.5.0.tgz, r-oldrel (x86_64): JSparO_1.5.0.tgz

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.