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Four measures of linkage disequilibrium are provided: the usual r^2 measure, the r^2_S measure (r^2 corrected by the structure sample), the r^2_V (r^2 corrected by the relatedness of genotyped individuals), the r^2_VS measure (r^2 corrected by both the relatedness of genotyped individuals and the structure of the sample).
| Version: | 1.3.3 |
| Imports: | parallel |
| Suggests: | testthat |
| Published: | 2020-08-26 |
| DOI: | 10.32614/CRAN.package.LDcorSV |
| Author: | David Desrousseaux, Florian Sandron, Aurélie Siberchicot, Christine Cierco-Ayrolles and Brigitte Mangin |
| Maintainer: | Aurélie Siberchicot <aurelie.siberchicot at univ-lyon1.fr> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | no |
| Materials: | README |
| CRAN checks: | LDcorSV results |
| Reference manual: | LDcorSV.pdf |
| Package source: | LDcorSV_1.3.3.tar.gz |
| Windows binaries: | r-devel: LDcorSV_1.3.3.zip, r-release: LDcorSV_1.3.3.zip, r-oldrel: LDcorSV_1.3.3.zip |
| macOS binaries: | r-release (arm64): LDcorSV_1.3.3.tgz, r-oldrel (arm64): LDcorSV_1.3.3.tgz, r-release (x86_64): LDcorSV_1.3.3.tgz, r-oldrel (x86_64): LDcorSV_1.3.3.tgz |
| Old sources: | LDcorSV archive |
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