The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.
Testing differential abundance at individual taxa and in a whole microbial community. The tests are based on the log-ratio of relative abundances. The tests accommodate continuous, discrete (binary, categorical), and multivariate traits, and allow adjustment of confounders. For more details see He (2026) <doi:10.64898/2026.04.07.716976>.
| Version: | 1.0 |
| Depends: | R (≥ 3.5.0) |
| Imports: | Rcpp (≥ 1.0.11), stats, permute, parallel, BiocParallel, matrixStats, abind, car |
| LinkingTo: | Rcpp, RcppArmadillo |
| Suggests: | testthat, survival |
| Published: | 2026-05-04 |
| DOI: | 10.32614/CRAN.package.LOCOM2 (may not be active yet) |
| Author: | Yi-Juan Hu [aut, cre] |
| Maintainer: | Yi-Juan Hu <yijuanhu at bicmr.pku.edu.cn> |
| BugReports: | https://github.com/yijuanhu/LOCOM2/issues |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | https://github.com/yijuanhu/LOCOM2 |
| NeedsCompilation: | yes |
| Materials: | README |
| CRAN checks: | LOCOM2 results |
| Reference manual: | LOCOM2.html , LOCOM2.pdf |
| Package source: | LOCOM2_1.0.tar.gz |
| Windows binaries: | r-devel: LOCOM2_1.0.zip, r-release: not available, r-oldrel: LOCOM2_1.0.zip |
| macOS binaries: | r-release (arm64): LOCOM2_1.0.tgz, r-oldrel (arm64): LOCOM2_1.0.tgz, r-release (x86_64): LOCOM2_1.0.tgz, r-oldrel (x86_64): LOCOM2_1.0.tgz |
Please use the canonical form https://CRAN.R-project.org/package=LOCOM2 to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.