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It can be used to create/encode molecular "license-plates" from sequences and to also decode the "license-plates" back to sequences. While initially created for transfer RNA-derived small fragments (tRFs), this tool can be used for any genomic sequences including but not limited to: tRFs, microRNAs, etc. The detailed information can reference to Pliatsika V, Loher P, Telonis AG, Rigoutsos I (2016) <doi:10.1093/bioinformatics/btw194>. It can also be used to annotate tRFs. The detailed information can reference to Loher P, Telonis AG, Rigoutsos I (2017) <doi:10.1038/srep41184>.
| Version: | 1.0.1 |
| Depends: | R (≥ 3.2.3) |
| Published: | 2021-09-03 |
| DOI: | 10.32614/CRAN.package.MINTplates |
| Author: | Shanliang Zhong [aut, cre] |
| Maintainer: | Shanliang Zhong <slzhong at foxmail.com> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | http://www.bio-inf.cn/ |
| NeedsCompilation: | no |
| In views: | Omics |
| CRAN checks: | MINTplates results |
| Reference manual: | MINTplates.pdf |
| Package source: | MINTplates_1.0.1.tar.gz |
| Windows binaries: | r-devel: MINTplates_1.0.1.zip, r-release: MINTplates_1.0.1.zip, r-oldrel: MINTplates_1.0.1.zip |
| macOS binaries: | r-release (arm64): MINTplates_1.0.1.tgz, r-oldrel (arm64): MINTplates_1.0.1.tgz, r-release (x86_64): MINTplates_1.0.1.tgz, r-oldrel (x86_64): MINTplates_1.0.1.tgz |
| Old sources: | MINTplates archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.