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NetworkDistance package is a collection of inter-graph distance measures. Instead of graph distance that measures the degree of farness between nodes within a graph, we consider each network as an object and compute distance between those objects.
You can install the released version of NetworkDistance from CRAN with:
install.packages("NetworkDistance")or the development version from github:
## install.packages("devtools")
## library(devtools)
devtools::install_github("kisungyou/NetworkDistance")We support following methds at this stage and the collection will be expanded continuously.
| Function | Reference | Description |
|---|---|---|
nd.centrality |
Roy et al. (2014) | Distance by Network Centrality Measures |
nd.csd |
Ipsen and Mikhailov (2002) | L2 Distance of Continuous Spectral Densities |
nd.dsd |
Wilson and Zhu (2008) | Discrete Spectral Distance |
nd.edd |
Edge Difference Distance | |
nd.extremal |
Jakobson and Rivin (2002) | Extremal Distance with Top-k Eigenvalues |
nd.gdd |
Hammond et al. (2013) | Graph Diffusion Distance |
nd.graphon |
Mukherjee et al. (2017) | Graphon Estimates Distance |
nd.hamming |
Hamming (1950) | Hamming Distance |
nd.him |
Jurman et al. (2015) | Hamming-Ipsen-Mikhailov (HIM) Distance |
nd.moments |
Mukherjee et al. (2017) | Log Moments Distanec |
nd.nfd |
Bao et al. (2018) | Network Flow Distance |
nd.wsd |
Fay et al. (2010) | Distance with Weighted Spectral Distribution |
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.