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A meta gene set analysis tool developed based on principles of Pareto dominance (William B T Mock (2011) <doi:10.1007/978-1-4020-9160-5_341>). It is designed to combine gene set analysis p-values from multiple transcriptome datasets (e.g., microarray and RNA-Seq). The novel Pareto method for p-value combination allows PEACH to properly model heterogeneity and correlation in Omics datasets.
| Version: | 0.1.1 |
| Depends: | R (≥ 3.5.0), MASS (≥ 7.3-50), mnormt (≥ 1.5-6), metap (≥ 1.3) |
| Published: | 2021-01-07 |
| DOI: | 10.32614/CRAN.package.PEACH |
| Author: | Jinyan Chan [aut, cre], Jinghua Gu [aut, cre] |
| Maintainer: | Jinyan Chan <Jinyan_Chan at baylor.edu> |
| License: | GPL-2 |
| NeedsCompilation: | no |
| CRAN checks: | PEACH results |
| Reference manual: | PEACH.pdf |
| Package source: | PEACH_0.1.1.tar.gz |
| Windows binaries: | r-devel: PEACH_0.1.1.zip, r-release: PEACH_0.1.1.zip, r-oldrel: PEACH_0.1.1.zip |
| macOS binaries: | r-release (arm64): PEACH_0.1.1.tgz, r-oldrel (arm64): PEACH_0.1.1.tgz, r-release (x86_64): PEACH_0.1.1.tgz, r-oldrel (x86_64): PEACH_0.1.1.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.