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Please cite PSCBS using one or more of the following references:

Olshen AB, Bengtsson H, Neuvial P, Spellman P, Olshen RA, Seshan VE (2011). “Parent-specific copy number in paired tumor-normal studies using circular binary segmentation.” Bioinformatics, 27(15). doi:10.1093/bioinformatics/btr329, https://doi.org/10.1093/bioinformatics/btr329.

Please cite PSCBS using one or more of the following references:

Bengtsson H, Neuvial P, Speed TP (2010). “TumorBoost: Normalization of allele-specific tumor copy numbers from a single pair of tumor-normal genotyping microarrays.” BMC Bioinformatics, 11(245). doi:10.1186/1471-2105-11-245, https://doi.org/10.1186/1471-2105-11-245.

Corresponding BibTeX entries:

  @Article{,
    author = {Adam B. Olshen and Henrik Bengtsson and Pierre Neuvial
      and Paul Spellman and Richard A. Olshen and Venkatraman E.
      Seshan},
    title = {Parent-specific copy number in paired tumor-normal studies
      using circular binary segmentation},
    journal = {Bioinformatics},
    year = {2011},
    volume = {27},
    number = {15},
    doi = {10.1093/bioinformatics/btr329},
    url = {https://doi.org/10.1093/bioinformatics/btr329},
  }
  @Article{,
    author = {H. Bengtsson and Pierre Neuvial and Terence P Speed},
    title = {TumorBoost: Normalization of allele-specific tumor copy
      numbers from a single pair of tumor-normal genotyping
      microarrays},
    journal = {BMC Bioinformatics},
    year = {2010},
    month = {May},
    volume = {11},
    number = {245},
    doi = {10.1186/1471-2105-11-245},
    url = {https://doi.org/10.1186/1471-2105-11-245},
  }

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.