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Please cite PSCBS using one or more of the following references:
Olshen AB, Bengtsson H, Neuvial P, Spellman P, Olshen RA, Seshan VE (2011). “Parent-specific copy number in paired tumor-normal studies using circular binary segmentation.” Bioinformatics, 27(15). doi:10.1093/bioinformatics/btr329, https://doi.org/10.1093/bioinformatics/btr329.
Please cite PSCBS using one or more of the following references:
Bengtsson H, Neuvial P, Speed TP (2010). “TumorBoost: Normalization of allele-specific tumor copy numbers from a single pair of tumor-normal genotyping microarrays.” BMC Bioinformatics, 11(245). doi:10.1186/1471-2105-11-245, https://doi.org/10.1186/1471-2105-11-245.
Corresponding BibTeX entries:
@Article{, author = {Adam B. Olshen and Henrik Bengtsson and Pierre Neuvial and Paul Spellman and Richard A. Olshen and Venkatraman E. Seshan}, title = {Parent-specific copy number in paired tumor-normal studies using circular binary segmentation}, journal = {Bioinformatics}, year = {2011}, volume = {27}, number = {15}, doi = {10.1093/bioinformatics/btr329}, url = {https://doi.org/10.1093/bioinformatics/btr329}, }
@Article{, author = {H. Bengtsson and Pierre Neuvial and Terence P Speed}, title = {TumorBoost: Normalization of allele-specific tumor copy numbers from a single pair of tumor-normal genotyping microarrays}, journal = {BMC Bioinformatics}, year = {2010}, month = {May}, volume = {11}, number = {245}, doi = {10.1186/1471-2105-11-245}, url = {https://doi.org/10.1186/1471-2105-11-245}, }
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.