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Phenotype

Remove Outliers from Phenotypic Data and Performs the Best Linear Unbiased Prediction

Installation

devtools::install_github("biozhp/Phenotype")

Usage

Remove outliers from phenotypic data

data("wheatph")
inlier <- outlier(x = wheatph, col = 5, fold = 1.5)

Calculate statistical indicators of phenotypic data

data("wheatph")
inlier <- outlier(x = wheatph, col = 5, fold = 1.5)
stat_out <- stat(x = inlier, col = 2)

Histogram drawing

data("wheatph")
inlier <- outlier(x = wheatph, col = 5, fold = 1.5)
stat_out <- stat(x = inlier, col = 2)
histplot(x = stat_out$mean)

Performs the Best Linear Unbiased Prediction (BLUP)

data("wheatph")
blup_out <- blup(x = wheatph, fold = 1.5)

Contact

For any bugs/issues/suggestions, please send emails to: Peng Zhao pengzhao@nwafu.edu.cn.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.