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Contains functions developed to combine the results of querying a plasmid database using short-read sequence typing with the results of a blast analysis against the query results.
| Version: | 0.1.6 |
| Depends: | R (≥ 3.1.2) |
| Imports: | ape, dplyr, gdata, ggdendro, ggplot2, grid, gridExtra, gtable, htmlwidgets, magrittr, plotly, plyr, RColorBrewer, reshape2, stringr |
| Suggests: | lintr |
| Published: | 2017-01-06 |
| DOI: | 10.32614/CRAN.package.Plasmidprofiler |
| Author: | Adrian Zetner [aut, cre] |
| Maintainer: | Adrian Zetner <adrian.zetner at phac-aspc.gc.ca> |
| License: | Apache License 2.0 |
| NeedsCompilation: | no |
| SystemRequirements: | Pandoc (>= 1.15) |
| CRAN checks: | Plasmidprofiler results |
| Reference manual: | Plasmidprofiler.pdf |
| Package source: | Plasmidprofiler_0.1.6.tar.gz |
| Windows binaries: | r-devel: Plasmidprofiler_0.1.6.zip, r-release: Plasmidprofiler_0.1.6.zip, r-oldrel: Plasmidprofiler_0.1.6.zip |
| macOS binaries: | r-release (arm64): Plasmidprofiler_0.1.6.tgz, r-oldrel (arm64): Plasmidprofiler_0.1.6.tgz, r-release (x86_64): Plasmidprofiler_0.1.6.tgz, r-oldrel (x86_64): Plasmidprofiler_0.1.6.tgz |
| Old sources: | Plasmidprofiler archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.