The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.

PlateVision: Automated qPCR Analysis and Visual Quality Control

Directly pipes raw quantitative PCR (qPCR) machine outputs into downstream analyses using the comparative Ct (Delta-Delta Ct) method described by Livak and Schmittgen (2001) <doi:10.1006/meth.2001.1262>. Streamlines the workflow from 'Excel' export to publication-ready plots. Integrates unique visual quality control by reconstructing 96-well plate heatmaps, allowing users to instantly detect pipetting errors, edge effects, and outliers. Key features include automated error propagation, laboratory master mix calculations, and generation of bar charts and volcano plots.

Version: 0.1.0
Imports: dplyr, readxl, ggplot2, stringr, plotly
Suggests: testthat (≥ 3.0.0)
Published: 2025-12-22
DOI: 10.32614/CRAN.package.PlateVision
Author: Shubham Love [aut, cre]
Maintainer: Shubham Love <shubhamlove2101 at gmail.com>
License: GPL-3
NeedsCompilation: no
CRAN checks: PlateVision results

Documentation:

Reference manual: PlateVision.html , PlateVision.pdf

Downloads:

Package source: PlateVision_0.1.0.tar.gz
Windows binaries: r-devel: PlateVision_0.1.0.zip, r-release: PlateVision_0.1.0.zip, r-oldrel: PlateVision_0.1.0.zip
macOS binaries: r-release (arm64): PlateVision_0.1.0.tgz, r-oldrel (arm64): PlateVision_0.1.0.tgz, r-release (x86_64): PlateVision_0.1.0.tgz, r-oldrel (x86_64): PlateVision_0.1.0.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=PlateVision to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.