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Hybridization probes for target sequences can be made based on melting temperature value calculated by R package 'TmCalculator' <https://CRAN.R-project.org/package=TmCalculator> and methods extended from Beliveau, B. J.,(2018) <doi:10.1073/pnas.1714530115>, and those hybridization probes can be used to capture specific target regions in fluorescence in situ hybridization and next generation sequence experiments.
| Version: | 1.1.0 |
| Depends: | R (≥ 2.10) |
| Imports: | TmCalculator (≥ 1.0.2), Biostrings (≥ 2.12.0) |
| Published: | 2022-01-31 |
| DOI: | 10.32614/CRAN.package.ProbeDeveloper |
| Author: | Junhui Li |
| Maintainer: | Junhui Li <junhuili at cau.edu.cn> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| NeedsCompilation: | no |
| CRAN checks: | ProbeDeveloper results |
| Reference manual: | ProbeDeveloper.pdf |
| Package source: | ProbeDeveloper_1.1.0.tar.gz |
| Windows binaries: | r-devel: ProbeDeveloper_1.1.0.zip, r-release: ProbeDeveloper_1.1.0.zip, r-oldrel: ProbeDeveloper_1.1.0.zip |
| macOS binaries: | r-release (arm64): ProbeDeveloper_1.1.0.tgz, r-oldrel (arm64): ProbeDeveloper_1.1.0.tgz, r-release (x86_64): ProbeDeveloper_1.1.0.tgz, r-oldrel (x86_64): ProbeDeveloper_1.1.0.tgz |
| Old sources: | ProbeDeveloper archive |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.