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A simple and flexible way to generate Circos 2D track plot images for genomic data visualization is implemented in this package. The types of plots include: heatmap, histogram, lines, scatterplot, tiles and plot items for further decorations include connector, link (lines and ribbons), and text (gene) label. All functions require only R graphics package that comes with R base installation.
Version: | 1.2.2 |
Depends: | R (≥ 2.10) |
Published: | 2021-12-19 |
DOI: | 10.32614/CRAN.package.RCircos |
Author: | Hongen Zhang |
Maintainer: | Hongen Zhang <hzhang.henry at gmail.com> |
License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
URL: | https://github.com/hzhanghenry/RCircos |
NeedsCompilation: | no |
Citation: | RCircos citation info |
In views: | Omics |
CRAN checks: | RCircos results |
Reference manual: | RCircos.pdf |
Vignettes: |
Using_RCircos |
Package source: | RCircos_1.2.2.tar.gz |
Windows binaries: | r-devel: RCircos_1.2.2.zip, r-release: RCircos_1.2.2.zip, r-oldrel: RCircos_1.2.2.zip |
macOS binaries: | r-release (arm64): RCircos_1.2.2.tgz, r-oldrel (arm64): RCircos_1.2.2.tgz, r-release (x86_64): RCircos_1.2.2.tgz, r-oldrel (x86_64): RCircos_1.2.2.tgz |
Old sources: | RCircos archive |
Reverse imports: | Basic4Cseq, chimeraviz, PACVr |
Please use the canonical form https://CRAN.R-project.org/package=RCircos to link to this page.
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.